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GEO accession:
Sample GSM29531
Query DataSets for GSM29531
Status
Public on Aug 25, 2004
Title
Luciferase control 2
Sample type
RNA
Source name
HeLa cells treat with luciferase siRNA
Organism
Homo sapiens
Extracted molecule
total RNA
Description
HeLa cells were treated with siRNA directed against firefly luciferase (as described in Mendell et al., Science, 2002; PubMed ID:12228722). RNA was isolated using Trizol and Qiagen RNeasy kit.
Submission date
Aug 24, 2004
Last update date
Mar 16, 2009
Contact name
Joshua T Mendell
E-mail(s)
jmendell@jhmi.edu
Phone
410-502-0428
Fax
410-502-1853
Organization name
Johns Hopkins University School of Medicine
Department
Institute of Genetic Medicine
Street address
733 N. Broadway, BRB 471
City
Baltimore
State/province
MD
ZIP/Postal code
21205
Country
USA
Platform ID
GPL8300
Series (1)
GSE1703
Determination of mRNA transcripts in HeLa cells that are regulated by RENT1
Data table header descriptions
ID_REF
Stat Pairs
probe pairs available
Stat Pairs Used
probe pairs used
VALUE
fluorescent value
ABS_CALL
present/absent call
DETECTION P-VALUE
Detection p-value:
Data table
ID_REF
Stat Pairs
Stat Pairs Used
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-MurIL2_at
20
20
11.8
A
0.794268
AFFX-MurIL10_at
20
20
49.8
A
0.470241
AFFX-MurIL4_at
20
20
5.6
A
0.749204
AFFX-MurFAS_at
20
20
11.7
A
0.60308
AFFX-BioB-5_at
20
20
487.3
P
0.001593
AFFX-BioB-M_at
20
20
1006.8
P
0.000095
AFFX-BioB-3_at
20
20
575.8
P
0.000297
AFFX-BioC-5_at
20
20
1626.7
P
0.00011
AFFX-BioC-3_at
20
20
1328.6
P
0.000052
AFFX-BioDn-5_at
20
20
1148.1
P
0.000044
AFFX-BioDn-3_at
20
20
7997.9
P
0.000095
AFFX-CreX-5_at
20
20
15714.5
P
0.000044
AFFX-CreX-3_at
20
20
19298.4
P
0.000044
AFFX-BioB-5_st
20
20
29.7
A
0.559354
AFFX-BioB-M_st
20
20
38.5
A
0.51489
AFFX-BioB-3_st
20
20
25.2
A
0.824672
AFFX-BioC-5_st
20
20
18.3
A
0.834139
AFFX-BioC-3_st
20
20
4
A
0.672921
AFFX-BioDn-5_st
20
20
74.7
A
0.227636
AFFX-BioDn-3_st
20
20
103
A
0.108979
Total number of rows:
12625
Table truncated, full table size
382 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM29531.CEL.gz
2.5 Mb
(ftp)
(http)
CEL
GSM29531.EXP.EXP.gz
559 b
(ftp)
(http)
EXP
GSM29531.RPT.gz
1011 b
(ftp)
(http)
RPT
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