|
Status |
Public on Feb 19, 2019 |
Title |
OL-2016-1423-01 |
Sample type |
genomic |
|
|
Source name |
Peripheral T-cell lymphoma
|
Organism |
Homo sapiens |
Characteristics |
disease: PTCL cell type: T preparation: FFPE
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Genomic DNAs were extracted according to manufacturer's standard protocols.
|
Label |
Biotin
|
Label protocol |
MIP probe annealing and hybridization were performed according to manufacturer's protocols.
|
|
|
Hybridization protocol |
Arrays were hybridized, washed, and stained in GeneChip Fluidics Station 450 according to manufacturer's protocols.
|
Scan protocol |
Arrays were scanned using the GeneChip 3000 7G scanner according to manufacturer's protocols.
|
Description |
Peripheral T-cell lymphoma sample.
|
Data processing |
Data processed using Affymetrix OncoScan Console (v1.3) software.
|
|
|
Submission date |
Feb 23, 2018 |
Last update date |
Feb 19, 2019 |
Contact name |
Siok-Bian Ng |
E-mail(s) |
patnsb@nus.edu.sg
|
Organization name |
National University Health System, Singapore
|
Department |
Department of Pathology
|
Street address |
National University Hospital, 5 Lower Kent Ridge Road, Main Building, level 3
|
City |
Singapore |
ZIP/Postal code |
119074 |
Country |
Singapore |
|
|
Platform ID |
GPL21558 |
Series (1) |
GSE111052 |
TCR and BCR loci copy number aberration detection for FFPE tissues using MIP-based assay |
|