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Sample GSM303402 Query DataSets for GSM303402
Status Public on Jul 20, 2010
Title p53_pRb_tumor_8
Sample type RNA
 
Source name skin tumor
Organism Mus musculus
Characteristics strain: FVB
tissue: squamous cell carcinoma
histological subtype: poorly differentiated
Extracted molecule total RNA
Extraction protocol RNeasy Fibrous Tissue Mini Kit (Qiagen)
Label biotin
Label protocol Affymetrix protocol
 
Hybridization protocol Affymetrix protocol
Scan protocol Affymetrix protocol
Description RNA integrity tested with Bioanalyzer (Agilent)
Data processing RMA normalization, log2 transformed
 
Submission date Jul 03, 2008
Last update date Jul 19, 2010
Contact name Ramon Garcia-Escudero
E-mail(s) ramon.garcia@ciemat.es, rgescudero@gmail.com
Organization name CIEMAT
Department Biomedical Innovation
Lab Molecular and Traslational Oncology
Street address Avda Complutense 40, Ed 70A
City Madrid
State/province Madrid
ZIP/Postal code 28040
Country Spain
 
Platform ID GPL1261
Series (1)
GSE11990 Gene expression profiling of mouse p53-deficient epidermal carcinoma defines molecular determinants of human cancer malignancy (training dataset)

Data table header descriptions
ID_REF
VALUE RMA; log2 signal values

Data table
ID_REF VALUE
1415670_at 9.761012
1415671_at 10.605783
1415672_at 11.341198
1415673_at 10.856055
1415674_a_at 9.461503
1415675_at 8.901531
1415676_a_at 11.264447
1415677_at 9.893916
1415678_at 9.962849
1415679_at 10.739217
1415680_at 9.533076
1415681_at 9.637917
1415682_at 8.502365
1415683_at 10.892002
1415684_at 7.608931
1415685_at 8.827718
1415686_at 9.67725
1415687_a_at 11.583489
1415688_at 10.217095
1415689_s_at 7.339061

Total number of rows: 45101

Table truncated, full table size 896 Kbytes.




Supplementary file Size Download File type/resource
GSM303402.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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