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Status
Public on Jul 08, 2008
Title
RT4D6_wild type Sox10 siRNA_rep2
Sample type
RNA
Source name
RT4D6 Schwannoma cells, treated with wild type siRNA for Sox 10, 48 hours
Organism
Rattus norvegicus Characteristics
Rat Schwannoma cell line that express genes associated with glial characteristics including Sox10, p75, GFAP, and S100. For additional information please see: Hai, M., Muja, N., DeVries, G.H., Quarles, R.H. and Patel, P.I.
Extracted molecule
total RNA
Extraction protocol
Qiagen protocol
Label
Biotin
Label protocol
Protocol from BioArray High Yield RNA Transcript Labeling Kit; Enzo Diagnostics, Farmingdale, NY
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
standard Affymetrix protocol
Data processing
MAS 5.0
Submission date
Jul 03, 2008
Last update date
Jul 07, 2008
Contact name
Sanghyuk Lee
E-mail(s)
sanghyuk@ewha.ac.kr Phone
+82232772888
Fax
+82-2-3277-3760
Organization name
Ewha Womans University
Department
Division of Life and Pharmaceutical Sciences
Street address
11-1 Daehyun-dong, Seodaemun-gu
City
Seoul
ZIP/Postal code
120-750
Country
South Korea
Platform ID
GPL1355 Series (1)
GSE12007 Identification of Sox10 target genes by comparative expression profiling
Data table header descriptions ID_REF VALUE Signal
ABS_CALL Absent/marginal/present
Data table ID_REF VALUE ABS_CALL AFFX-BioB-5_at
613.8
P
AFFX-BioB-M_at
774.7
P
AFFX-BioB-3_at
511.4
P
AFFX-BioC-5_at
1799.5
P
AFFX-BioC-3_at
1870.3
P
AFFX-BioDn-5_at
3541.2
P
AFFX-BioDn-3_at
6588.8
P
AFFX-CreX-5_at
19614.1
P
AFFX-CreX-3_at
24242.4
P
AFFX-DapX-5_at
1220.0
P
AFFX-DapX-M_at
1841.0
P
AFFX-DapX-3_at
2460.2
P
AFFX-LysX-5_at
167.7
P
AFFX-LysX-M_at
232.8
P
AFFX-LysX-3_at
515.9
P
AFFX-PheX-5_at
210.7
P
AFFX-PheX-M_at
259.8
P
AFFX-PheX-3_at
340.6
P
AFFX-ThrX-5_at
267.7
P
AFFX-ThrX-M_at
388.3
P
31099 565 Kbytes .Supplementary file Size Download File type/resource GSM303511.CEL.gz
2.5 Mb
(ftp) (http) CEL
Processed data included within Sample table
