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Status
Public on Jul 08, 2008
Title
RT4D6_mutant Sox10 siRNA_rep2
Sample type
RNA
Source name
RT4D6 Schwannoma cells, treated with mutant siRNA for Sox 10, 48 hours
Organism
Rattus norvegicus Characteristics
Rat Schwannoma cell line that express genes associated with glial characteristics including Sox10, p75, GFAP, and S100. For additional information please see: Hai, M., Muja, N., DeVries, G.H., Quarles, R.H. and Patel, P.I.
Extracted molecule
total RNA
Extraction protocol
Qiagen protocol
Label
Biotin
Label protocol
Protocol from BioArray High Yield RNA Transcript Labeling Kit; Enzo Diagnostics, Farmingdale, NY
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
standard Affymetrix protocol
Data processing
MAS 5.0
Submission date
Jul 03, 2008
Last update date
Jul 07, 2008
Contact name
Sanghyuk Lee
E-mail(s)
sanghyuk@ewha.ac.kr Phone
+82232772888
Fax
+82-2-3277-3760
Organization name
Ewha Womans University
Department
Division of Life and Pharmaceutical Sciences
Street address
11-1 Daehyun-dong, Seodaemun-gu
City
Seoul
ZIP/Postal code
120-750
Country
South Korea
Platform ID
GPL1355 Series (1)
GSE12007 Identification of Sox10 target genes by comparative expression profiling
Data table header descriptions ID_REF VALUE Signal
ABS_CALL Absent/marginal/present
Data table ID_REF VALUE ABS_CALL AFFX-BioB-5_at
543.2
P
AFFX-BioB-M_at
716.4
P
AFFX-BioB-3_at
481.7
P
AFFX-BioC-5_at
1560.9
P
AFFX-BioC-3_at
1604.3
P
AFFX-BioDn-5_at
2795.6
P
AFFX-BioDn-3_at
6428.3
P
AFFX-CreX-5_at
16700.2
P
AFFX-CreX-3_at
22971.0
P
AFFX-DapX-5_at
807.8
P
AFFX-DapX-M_at
1425.5
P
AFFX-DapX-3_at
1830.6
P
AFFX-LysX-5_at
86.4
P
AFFX-LysX-M_at
166.6
P
AFFX-LysX-3_at
455.0
P
AFFX-PheX-5_at
125.9
P
AFFX-PheX-M_at
262.9
P
AFFX-PheX-3_at
238.1
P
AFFX-ThrX-5_at
220.2
P
AFFX-ThrX-M_at
255.0
P
31099 567 Kbytes .Supplementary file Size Download File type/resource GSM303512.CEL.gz
2.5 Mb
(ftp) (http) CEL
Processed data included within Sample table
