|
| Status |
Public on May 03, 2019 |
| Title |
98 Frontal cortex of the human brain |
| Sample type |
genomic |
| |
|
| Source name |
Frontal cortex of the human brain
|
| Organism |
Homo sapiens |
| Characteristics |
index: 88
tissuebank.id: AN11287
age: 49
Sex: Male
race: ?
dist.dx: Schizophrenia
tissuebank: Harvard HBTRC
pmi: 8.17
sampleID: 98
|
| Treatment protocol |
No treatment was applied to these samples.
|
| Growth protocol |
DNA was extracted from post-mortem brain samples. No growth protocols were used.
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA was extracted using standard phenol-chloroform extract methods
|
| Label |
Cy3 and Cy5
|
| Label protocol |
Reagent/array were purchased from Illumina. The experiment was carried out in Sickkids TCAG Microarray facility according to the recommended protocol by Illumina.
|
| |
|
| Hybridization protocol |
Reagent/array were purchased from Illumina. The experiment was carried out in Sickkids TCAG Microarray facility according to the recommended protocol by Illumina.
|
| Scan protocol |
Reagent/array were purchased from Illumina. The experiment was carried out in Sickkids TCAG Microarray facility according to the recommended protocol by Illumina.
|
| Description |
Frontal cortex of the human brain
|
| Data processing |
Genome Studio was used to process raw intensities, following manufacturer's suggestions
|
| |
|
| Submission date |
Apr 12, 2018 |
| Last update date |
May 03, 2019 |
| Contact name |
Shraddha Pai |
| E-mail(s) |
shraddha.pai@utoronto.ca
|
| Organization name |
University of Toronto
|
| Street address |
160 College Street, Room 602
|
| City |
Toronto |
| State/province |
ON |
| ZIP/Postal code |
M5S 3E1 |
| Country |
Canada |
| |
|
| Platform ID |
GPL22819 |
| Series (2) |
| GSE112525 |
DNA methylation in neurons from post-mortem brains in schizophrenia and bipolar disorder |
| GSE113093 |
Genotypes of case-control samples in major psychosis |
|
