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Status |
Public on Sep 30, 2019 |
Title |
14.5 R1 +HI_R1 |
Sample type |
RNA |
|
|
Source name |
enzymatically disaggregated embryonic heart ventricles into single cells from Wt1GFPKI mice
|
Organism |
Mus musculus |
Characteristics |
stage of development: E14.5
|
Treatment protocol |
Samples were FACS sorted and RNA lysis buffer was added post sorting to avoid mRNA changes
|
Growth protocol |
cells were extracted from enzymatically disaggregated embryonic heart ventricles into single cells and used directly for mRNA studies.
|
Extracted molecule |
total RNA |
Extraction protocol |
Rneasy Total RNA isolation
|
Label |
biotin
|
Label protocol |
Biotinylated cRNA was prepared using the Illumina TotalPrep RNA Amplification Kit (Ambion, Inc., Austin, TX, U.S.A.) according to the manufacturer’s specifications with an input of 200 ng total RNA.
|
|
|
Hybridization protocol |
Hybridization and washing were performed according to the Illumina Manual “Direct Hybridization Assay Guide”
|
Scan protocol |
Scanning was performed on the Illumina iScan (Illumina, Inc., San Diego, CA, U.S.A.).
|
Description |
Wt1GFP++ Cells at day 14.5
|
Data processing |
Image analysis and extraction of raw expression data was performed with Illumina GenomeStudio v2011.1 Gene Expression software with default settings (no background substraction and no normalization)
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|
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Submission date |
Apr 17, 2018 |
Last update date |
Sep 30, 2019 |
Contact name |
Fernando O Martinez Estrada |
E-mail(s) |
f.martinezestrada@surrey.ac.uk
|
Organization name |
University of Surrey
|
Department |
Faculty of Health & Medical Sciences
|
Lab |
Innate Immunity
|
Street address |
Stag Hill
|
City |
Guildford |
State/province |
Surrey |
ZIP/Postal code |
GU2 7XH |
Country |
United Kingdom |
|
|
Platform ID |
GPL6887 |
Series (2) |
GSE113273 |
Identification of the gene profiling of Wt1GFP enriched epicardial cells at different stages of embryonic heart development [H] |
GSE113276 |
Identification of the gene profiling of Wt1GFP expressing cardiomyocytes at different stages of embryonic heart development |
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