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Sample GSM31285 Query DataSets for GSM31285
Status Public on Jan 20, 2005
Title Arrocillo leaves compared to W23 b,pl (-UV-B)
Sample type RNA
 
Channel 1
Source name W23 b,pl leaves (-UV-B)
Organism Zea mays
Extracted molecule total RNA
 
Channel 2
Source name Arrocillo leaves (-UV-B)
Organism Zea mays
Extracted molecule total RNA
 
 
Description In these comparisons, samples from one landrace were hybridized with samples from W23 line under the same treatment (+UV-B, supplementary UV-B; -UV-B, no UV-B).
 
Submission date Sep 29, 2004
Last update date May 27, 2005
Contact name Paula Casati
E-mail(s) casati@cefobi-conicet.gov.ar
Phone 54-341-4371955
Organization name Universidad Nacional de Rosario
Department Biological Sciences
Lab Casati
Street address Suipacha 531
City Rosario
State/province Santa Fe
ZIP/Postal code 2000
Country Argentina
 
Platform ID GPL499
Series (1)
GSE1807 Solar UV-B regulation of high altitude maize

Data table header descriptions
ID_REF
VALUE log 2 ratio Arrocillo/W23
ratio (M-N)/(J-K) ratio Arrocillo/W23
CH1I Mean Intensity Cy3
CH1B Mean Intensity Cy3 of background
CH1AB Median Intensity Cy3 of background
CH2I Mean Intensity Cy5
CH2B Mean Intensity Cy5 of background
CH2AB Median Intensity Cy5 of background
SPIX See Scanalyze Manual
BGPIX See Scanalyze Manual
EDGE See Scanalyze Manual
RAT2 See Scanalyze Manual
MRAT See Scanalyze Manual
REGR See Scanalyze Manual
CORR See Scanalyze Manual
LFRAT See Scanalyze Manual
CH1GTB1 See Scanalyze Manual
CH2GTB1 See Scanalyze Manual
CH1GTB2 See Scanalyze Manual
CH2GTB2 See Scanalyze Manual
CH1EDGEA See Scanalyze Manual
CH2EDGEA See Scanalyze Manual
FLAG See Scanalyze Manual
CH1KSD See Scanalyze Manual
CH1KSP See Scanalyze Manual
CH2KSD See Scanalyze Manual
CH2KSP See Scanalyze Manual

Data table
ID_REF VALUE ratio (M-N)/(J-K) CH1I CH1B CH1AB CH2I CH2B CH2AB SPIX BGPIX EDGE RAT2 MRAT REGR CORR LFRAT CH1GTB1 CH2GTB1 CH1GTB2 CH2GTB2 CH1EDGEA CH2EDGEA FLAG CH1KSD CH1KSP CH2KSD CH2KSP
1 1.057280838 2.081005587 1008 292 368 2163 673 1796 156 1215 0 2.081 1.065 1.426 0.2278 26.81 0.7564 0.6603 0.6154 0.5064 0.2178 0.3046 0 0.5191 1.69E-33 0.3046 8.14E-12
2 1.260299438 2.395454545 1389 289 375 3363 728 1773 156 1010 0 2.395 1.009 2.294 0.4382 11.59 0.8782 0.9103 0.7051 0.75 0.2959 0.3589 0 0.6581 0.00E+00 0.5312 2.77E-34
3 0.511348513 1.425381904 1128 277 354 1913 700 1384 156 1010 0 1.425 0.9838 1.144 0.2591 16.23 0.8718 0.8333 0.641 0.6538 0.1952 0.238 0 0.5886 5.33E-42 0.4638 3.08E-26
4 0.552178127 1.466297787 2256 268 368 3599 684 1299 156 1010 0 1.466 1 1.17 0.528 3.618 0.859 0.8013 0.641 0.5513 0.3835 0.4034 0 0.5488 1.42E-36 0.3597 5.93E-16
5 0.961999678 1.948008103 1745 264 362 3544 659 1489 156 1010 0 1.948 1.121 0.7998 0.2418 12.51 0.8654 0.8397 0.6603 0.6218 0.3306 0.4075 0 0.5513 6.76E-37 0.4353 3.70E-23
6 0.528274083 1.442202835 2094 260 336 3211 566 1310 156 1010 0 1.442 0.9565 0.7846 0.3019 7.466 0.8526 0.8205 0.7115 0.5962 0.3886 0.367 0 0.6066 1.40E-44 0.4122 8.07E-21
7 0.552817693 1.466947961 966 255 347 1552 509 1051 156 1010 0 1.467 0.8429 0.9451 0.2352 16.08 0.9038 0.859 0.7628 0.6859 0.233 0.2332 0 0.6673 0.00E+00 0.4989 2.73E-30
8 0.14831266 1.108272506 1080 258 359 1430 519 1072 156 1010 0 1.108 0.8925 1.166 0.4506 5.08 0.8846 0.8718 0.7308 0.6667 0.2654 0.2614 0 0.6418 0.00E+00 0.493 1.37E-29
9 0.10143175 1.072837633 914 255 355 1212 505 1125 156 1010 0 1.073 0.8988 1.2 0.3193 11.02 0.8782 0.8077 0.75 0.7115 0.2 0.215 0 0.6586 0.00E+00 0.5443 5.68E-36
10 -0.522933303 0.69595537 963 246 351 958 459 873 156 1024 0 0.696 0.7971 0.2612 0.1594 6.608 0.7692 0.6667 0.5 0.4551 0.3006 0.2477 0 0.4558 2.10E-25 0.3005 2.77E-11
11 -0.0669787 0.954635108 1249 235 343 1404 436 730 156 1023 0 0.9546 0.7935 0.29 0.3009 0.8848 0.7756 0.7115 0.5128 0.4744 0.3209 0.3054 0 0.4577 1.33E-25 0.332 1.14E-13
12 0.674174483 1.595683453 932 237 307 1530 421 695 156 1019 0 1.596 0.7446 1.435 0.3748 9.617 0.6923 0.7179 0.5256 0.4551 0.2719 0.3045 0 0.4519 5.82E-25 0.3182 1.37E-12
13 -0.492396382 0.710843373 1069 239 315 1003 413 648 156 1019 0 0.7108 0.7661 0.6528 0.446 2.204 0.6474 0.6346 0.5385 0.4936 0.3937 0.2995 0 0.4526 4.95E-25 0.349 4.70E-15
14 -0.472794761 0.720567376 955 250 326 923 415 652 156 1010 0 0.7206 0.8 0.6971 0.3869 3.509 0.8077 0.7821 0.5577 0.5256 0.332 0.2312 0 0.465 2.27E-26 0.3891 1.36E-18
15 -0.421061287 0.746875 1212 252 403 1149 432 778 156 1010 0 0.7469 0.7038 0.5799 0.3857 2.564 0.8846 0.7885 0.6346 0.5513 0.3332 0.2788 0 0.5366 5.59E-35 0.3846 3.54E-18
16 0.243189594 1.183606557 539 234 404 776 415 766 156 1010 0 1.184 0.9179 0.3514 0.207 5.537 0.8462 0.7885 0.6154 0.4103 0.2491 0.2438 0 0.5141 3.80E-32 0.3148 2.58E-12
17 -0.199672345 0.870748299 519 225 327 654 398 550 156 1010 0 0.8707 1.028 0.2431 0.2038 2.195 0.8782 0.7372 0.6731 0.4551 0.2359 0.2037 0 0.6326 0.00E+00 0.3491 4.75E-15
18 0.443471511 1.359872611 546 232 300 823 396 459 156 1010 0 1.36 0.8522 0.6985 0.2479 10.03 0.8654 0.7372 0.6538 0.4231 0.2262 0.2336 0 0.5839 2.43E-41 0.3191 1.21E-12
19 -0.758271973 0.591204037 1622 235 301 1224 404 469 156 1010 0 0.5912 0.6328 0.6532 0.9083 0.6965 0.8526 0.8013 0.7372 0.641 0.338 0.2638 0 0.651 0.00E+00 0.5209 5.57E-33
20 -0.965500627 0.512100678 1258 225 290 919 390 469 156 1010 0 0.5121 0.5208 0.4165 0.5833 0.5718 0.8718 0.7564 0.7244 0.5962 0.3359 0.2225 0 0.6328 0.00E+00 0.4765 1.15E-27

Total number of rows: 17296

Table truncated, full table size 2933 Kbytes.




Supplementary data files not provided
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