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Sample GSM315 Query DataSets for GSM315
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rcch-35, tumor 1 (part 2 of 2)
Sample type RNA
 
Source name renal chromophobe cell cancer (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=I
grade.of.malignancy=2
type=chromophobe
tumor.site=kidney
multiplefoci=NA
survival.months=NA
died=NA
tumorsize.cm=6
sex=m
age=52
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal chromophobe cell cancer
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3626238 reuse=2 date=01-Mar-2000
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL10
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 171163 28224 142939
2 37722 28224 9498
3 159513 28224 131289
4 8426 28224 -19798
5 47526 28224 19302
6 162448 28224 134224
7 18083 28224 -10141
8 50288 28224 22064
9 67350 28224 39126
10 183003 28224 154779
11 53317 28224 25093
12 163008 28224 134784
13 5284 28224 -22940
14 28920 28224 696
15 8311 28224 -19913
16 9252 28224 -18972
17 390227 19881 370346
18 19693 19881 -188
19 19193 19881 -688
20 15205 19881 -4676

Total number of rows: 36864

Table truncated, full table size 835 Kbytes.




Supplementary data files not provided

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