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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Dec 31, 2018 |
| Title |
WT Control 3 |
| Sample type |
SRA |
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| Source name |
Midbrain
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| Organism |
Mus musculus |
| Characteristics |
treatment: control
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| Treatment protocol |
Two months old WT and TG mice were treated for 2-months
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| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted using the mirVana miRNA Isolation Kit following the manufacturer’s protocol for total RNA extraction
RNA libraries were prepared for sequencing using standard Illumina protocols
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| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina HiSeq 2000 |
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| Description |
MBG-3
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| Data processing |
none provided by the submitter
Supplementary_files_format_and_content: entrez gene ID and counts
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| Submission date |
Jun 13, 2018 |
| Last update date |
Dec 31, 2018 |
| Contact name |
Mei-Ling Bermudez |
| E-mail(s) |
bermudmn@mail.uc.edu
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| Organization name |
University of Cincinnati
|
| Department |
Environmental Health
|
| Street address |
160 Panzeca Way
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| City |
Cincinnati |
| State/province |
Ohio |
| ZIP/Postal code |
45267 |
| Country |
USA |
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| Platform ID |
GPL13112 |
| Series (1) |
| GSE115769 |
RNA-Sequencing of carnosine treated wild-type BDF1 (WT) and transgenic Thy1-aSyn mice |
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| Relations |
| BioSample |
SAMN09407319 |
| SRA |
SRX4212054 |
| Supplementary data files not provided |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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