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Sample GSM322258 Query DataSets for GSM322258
Status Public on Sep 09, 2010
Title Buffycoat_patient50_time11
Sample type RNA
 
Source name Buffycoat
Organism Homo sapiens
Characteristics Gender:Male,Ethnicity:Caucasian,Age:59,VAP day:7
Growth protocol Samples from each patient were enriched using a previously described (monocyte or Neutrophil) enrichment protocol or Buffy coat protocol.
Extracted molecule total RNA
Extraction protocol Modiefied Qiagen Rneasy protocol
Label biotin
Label protocol Affymetrix GeneChip IVT labeling
 
Hybridization protocol GeneCip IVT hyb. Affymetrix EukGE-WSv5 wash and stain protocol
Scan protocol Affymetrix GeneChip using GCOS.
Description Gene expression data (Affymetrix GeneChip Human Genome U133 Plus 2.0 Array)
Data processing The data were analyzed with RMA using default analysis settings and log2 scaling.
 
Submission date Sep 18, 2008
Last update date Sep 09, 2009
Contact name J Perren Cobb
E-mail(s) jpcobb@partners.org
Phone 314-362-1264
Fax 314-362-7474
URL http://www.cia.wustl.edu
Organization name Washington University in St. Louis
Lab Cellular Injury and Adaptation Laboratory
Street address Campus Box 8109, 660 South Euclid Avenue
City St. Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platform ID GPL570
Series (1)
GSE12838 The Monocyte Advantage

Data table header descriptions
ID_REF
VALUE RMA Signal

Data table
ID_REF VALUE
1007_s_at 4.217237353
1053_at 3.630532901
117_at 7.524139043
121_at 5.605009571
1255_g_at 1.775191409
1294_at 6.168705915
1316_at 3.187062163
1320_at 2.396742675
1405_i_at 11.28539803
1431_at 1.927243873
1438_at 2.834929191
1487_at 6.311385115
1494_f_at 3.637665206
1552256_a_at 4.047161831
1552257_a_at 4.189146746
1552258_at 3.713037018
1552261_at 2.352118127
1552263_at 8.557231188
1552264_a_at 8.495043435
1552266_at 2.023436091

Total number of rows: 54675

Table truncated, full table size 1211 Kbytes.




Supplementary file Size Download File type/resource
GSM322258.CEL.gz 7.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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