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Sample GSM322297 Query DataSets for GSM322297
Status Public on Sep 09, 2010
Title Neutrophil_patient50_time5
Sample type RNA
 
Source name Neutrophil
Organism Homo sapiens
Characteristics Gender:Male,Ethnicity:Caucasian,Age:59,VAP day:7
Growth protocol Samples from each patient were enriched using a previously described (monocyte or Neutrophil) enrichment protocol or Buffy coat protocol.
Extracted molecule total RNA
Extraction protocol Modiefied Qiagen Rneasy protocol
Label biotin
Label protocol Affymetrix GeneChip IVT labeling
 
Hybridization protocol GeneCip IVT hyb. Affymetrix EukGE-WSv5 wash and stain protocol
Scan protocol Affymetrix GeneChip using GCOS.
Description Gene expression data (Affymetrix GeneChip Human Genome U133 Plus 2.0 Array)
Data processing The data were analyzed with RMA using default analysis settings and log2 scaling.
 
Submission date Sep 18, 2008
Last update date Sep 01, 2016
Contact name J Perren Cobb
E-mail(s) jpcobb@partners.org
Phone 314-362-1264
Fax 314-362-7474
URL http://www.cia.wustl.edu
Organization name Washington University in St. Louis
Lab Cellular Injury and Adaptation Laboratory
Street address Campus Box 8109, 660 South Euclid Avenue
City St. Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platform ID GPL570
Series (1)
GSE12838 The Monocyte Advantage
Relations
Reanalyzed by GSE86362

Data table header descriptions
ID_REF
VALUE RMA Signal

Data table
ID_REF VALUE
1007_s_at 4.287993749
1053_at 3.742638731
117_at 8.364282669
121_at 5.617540496
1255_g_at 2.137555394
1294_at 5.542582023
1316_at 3.234568173
1320_at 2.528127892
1405_i_at 8.313940986
1431_at 2.056336838
1438_at 2.879830358
1487_at 6.322467395
1494_f_at 3.546460656
1552256_a_at 3.56198192
1552257_a_at 5.047262984
1552258_at 4.189327632
1552261_at 2.630449077
1552263_at 9.042750003
1552264_a_at 9.126309857
1552266_at 2.414360555

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM322297.CEL.gz 7.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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