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Sample GSM322408 Query DataSets for GSM322408
Status Public on Sep 19, 2008
Title Human Tonsil Naïve Bcells rep2
Sample type RNA
 
Source name Human Tonsil Naïve Bcells
Organism Homo sapiens
Characteristics Human Tonsil Naïve Bcells
Treatment protocol NA
Growth protocol NA
Extracted molecule total RNA
Extraction protocol standard Affymetreix protocol
Label biotin
Label protocol standard Affymetreix protocol
 
Hybridization protocol standard Affymetreix protocol
Scan protocol standard Affymetreix protocol
Description Gene expression data from Naïve B cells
Data processing The CEL file extracted and normalized using Robust Multi-array Average(GCRMA) prob summarization algorithms (perform background correction, Normalization, and probe summarization) while exported to GeneSpring 7.3.1. Normalization to median was applied in geneSpring as an additional normalization.
 
Submission date Sep 18, 2008
Last update date Sep 01, 2016
Contact name Dereje D. Jima
E-mail(s) ddjima2014@gmail.com
Phone 9195155932
Organization name North Carolina State University
Department Center for Human Health and the Environment (CHHE) and Bioinformatics Research Center (BRC)
Street address 850 Campus Drive
City Raleigh
State/province NC
ZIP/Postal code 27708
Country USA
 
Platform ID GPL96
Series (1)
GSE12845 B cell subsets from human tonsil and blood
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Normalized and summarized probe-level intensity measurment by GCRMA algorithms and median centered.

Data table
ID_REF VALUE
1007_s_at 1.5790925
1053_at 0.92154
117_at 0.74379224
121_at 1.1592067
1255_g_at 0.49435347
1294_at 1.6061089
1316_at 1.1083747
1320_at 0.6202907
1405_i_at 0.86576515
1431_at 0.76699793
1438_at 0.45758176
1487_at 1.0004483
1494_f_at 0.682595
1598_g_at 1.0056893
160020_at 0.97578573
1729_at 0.97601366
1773_at 0.6147918
177_at 0.78685015
179_at 1.1051615
1861_at 0.58698815

Total number of rows: 22283

Table truncated, full table size 461 Kbytes.




Supplementary file Size Download File type/resource
GSM322408.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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