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Sample GSM325140 Query DataSets for GSM325140
Status Public on Nov 04, 2009
Title Nova2 KO cortex 4
Sample type RNA
 
Source name mouse Nova2 knockout cortex
Organism Mus musculus
Characteristics strain: CD1
tissue: P10 cortex
Extracted molecule total RNA
Extraction protocol Trizol Extraction
Label TdT (Affymetrix WT Sense Target Labeling Assay)
Label protocol Affymetrix WT Sense Target Labeling Assay
 
Hybridization protocol Affymetrix WT Sense Target Labeling Assay
Scan protocol The scanning and image acquisition was done using Affymetrix GeneChip Operating Software (GCOS) v1.4. The scanner model is GeneChip Scanner 3000 7G.
Description mouse Nova2 knockout cortex
Data processing ArrayAssist (Stratagene); PLIER extended-antigenomic; DABG (p<0.05)
 
Submission date Sep 29, 2008
Last update date Nov 03, 2009
Contact name Donny D Licatalosi
Organization name Case Western Reserve University
Lab Licatalosi
Street address 10900 Euclid Ave
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
 
Platform ID GPL6193
Series (2)
GSE12965 Wild type vs. Nova2 KO mouse P10 cortex RNA
GSE17374 Wild type vs. Nova2 KO mouse: Exon array data

Data table header descriptions
ID_REF
VALUE Probeset signal values from ArrayAssist software

Data table
ID_REF VALUE
4304969 9.222324
4304973 7.5472593
4305019 4.2998557
4305053 7.8163686
4305096 4.7120214
4305160 8.720601
4305182 5.512647
4305192 9.023821
4305210 8.046476
4305223 8.186602
4305251 4.069354
4305305 7.6968856
4305310 4.818696
4305333 9.327523
4305357 9.204023
4305397 6.119952
4305443 12.12231
4305486 8.624227
4305534 4.344422
4305570 7.257898

Total number of rows: 391597

Table truncated, full table size 6648 Kbytes.




Supplementary file Size Download File type/resource
GSM325140.CEL.gz 39.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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