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Sample GSM325323 Query DataSets for GSM325323
Status Public on Apr 16, 2009
Title Beak (fused teeth)
Sample type RNA
 
Source name Beak tissue of pufferfish
Organism Tetraodon nigroviridis
Characteristics Beak
Extracted molecule polyA RNA
Extraction protocol mRNA extraction and cDNA synthesis were done as described by Zhang et al., 2004 (PMID: 15588312)
Label Cy5 or Cy3
Label protocol cDNA labelling procedures were done as described by Zhang et al., 2004 (PMID: 15588312)
 
Hybridization protocol Hybridizations were carried out as described by Zhang et al., 2004 (PMID: 15588312)
Scan protocol Arrays were scanned on an Axon 4000A scanner and images quatified using GenePix
Description Beak tissue of pufferfish
Data processing Data was processed as described by Zhang et al., 2004 (PMID: 15588312) and dye-swapped replicates were averaged.
 
Submission date Sep 29, 2008
Last update date Apr 16, 2009
Contact name Esther T Chan
Organization name Celgene Corporation
Street address 1500 Owens Street, Suite 500
City San Francisco
State/province California
ZIP/Postal code 94158
Country USA
 
Platform ID GPL7401
Series (1)
GSE12976 Expression of known and predicted genes in tissues of Tetraodon nigroviridis (pufferfish)

Data table header descriptions
ID_REF Unique identifier
VALUE Arcsinh-transformed normalized intensity.

Data table
ID_REF VALUE
AY374473 5.80413
AY374473_B 5.500606
AY374473ALT 5.318076
AY374473ALT_B 5.505645
AY374474 5.426441
AY374474_B 4.976844
AY374475 5.326756
AY374475_B 5.673507
AY374477 5.523437
AY374477_B 5.663769
AY374477ALT 5.558566
AY374477ALT_B 5.032623
AY374478 4.535267
AY374478_B 4.220876
AY374478ALT 4.85855
AY374478ALT_B 4.750238
AY374479 4.265711
AY374479_B 4.051181
AY374479ALT 5.646206
AY374479ALT_B 5.386285

Total number of rows: 41533

Table truncated, full table size 1137 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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