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Sample GSM325325 Query DataSets for GSM325325
Status Public on Apr 16, 2009
Title Calvaria
Sample type RNA
 
Source name Calvaria tissue of pufferfish
Organism Tetraodon nigroviridis
Characteristics Calvaria
Extracted molecule polyA RNA
Extraction protocol mRNA extraction and cDNA synthesis were done as described by Zhang et al., 2004 (PMID: 15588312)
Label Cy5 or Cy3
Label protocol cDNA labelling procedures were done as described by Zhang et al., 2004 (PMID: 15588312)
 
Hybridization protocol Hybridizations were carried out as described by Zhang et al., 2004 (PMID: 15588312)
Scan protocol Arrays were scanned on an Axon 4000A scanner and images quatified using GenePix
Description Calvaria tissue of pufferfish
Data processing Data was processed as described by Zhang et al., 2004 (PMID: 15588312) and dye-swapped replicates were averaged.
 
Submission date Sep 29, 2008
Last update date Apr 16, 2009
Contact name Esther T Chan
Organization name Celgene Corporation
Street address 1500 Owens Street, Suite 500
City San Francisco
State/province California
ZIP/Postal code 94158
Country USA
 
Platform ID GPL7401
Series (1)
GSE12976 Expression of known and predicted genes in tissues of Tetraodon nigroviridis (pufferfish)

Data table header descriptions
ID_REF Unique identifier
VALUE Arcsinh-transformed normalized intensity.

Data table
ID_REF VALUE
AY374473 4.835572
AY374473_B 4.495721
AY374473ALT 4.623181
AY374473ALT_B 5.008517
AY374474 5.941421
AY374474_B 4.825558
AY374475 5.541227
AY374475_B 5.768751
AY374477 5.368384
AY374477_B 5.524998
AY374477ALT 5.491659
AY374477ALT_B 5.328571
AY374478 5.204286
AY374478_B 5.491401
AY374478ALT 5.244357
AY374478ALT_B 5.415527
AY374479 4.071463
AY374479_B 4.78875
AY374479ALT 5.210096
AY374479ALT_B 4.925714

Total number of rows: 41533

Table truncated, full table size 1137 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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