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Sample GSM325328 Query DataSets for GSM325328
Status Public on Apr 16, 2009
Title Gallbladder
Sample type RNA
 
Source name Gallbladder tissue of pufferfish
Organism Tetraodon nigroviridis
Characteristics Gallbladder
Extracted molecule polyA RNA
Extraction protocol mRNA extraction and cDNA synthesis were done as described by Zhang et al., 2004 (PMID: 15588312)
Label Cy5 or Cy3
Label protocol cDNA labelling procedures were done as described by Zhang et al., 2004 (PMID: 15588312)
 
Hybridization protocol Hybridizations were carried out as described by Zhang et al., 2004 (PMID: 15588312)
Scan protocol Arrays were scanned on an Axon 4000A scanner and images quatified using GenePix
Description Gallbladder tissue of pufferfish
Data processing Data was processed as described by Zhang et al., 2004 (PMID: 15588312) and dye-swapped replicates were averaged.
 
Submission date Sep 29, 2008
Last update date Apr 16, 2009
Contact name Esther T Chan
Organization name Celgene Corporation
Street address 1500 Owens Street, Suite 500
City San Francisco
State/province California
ZIP/Postal code 94158
Country USA
 
Platform ID GPL7401
Series (1)
GSE12976 Expression of known and predicted genes in tissues of Tetraodon nigroviridis (pufferfish)

Data table header descriptions
ID_REF Unique identifier
VALUE Arcsinh-transformed normalized intensity.

Data table
ID_REF VALUE
AY374473 4.992342
AY374473_B 4.886183
AY374473ALT 4.97137
AY374473ALT_B 5.376893
AY374474 5.649667
AY374474_B 5.100677
AY374475 4.755459
AY374475_B 4.917937
AY374477 5.613502
AY374477_B 6.009631
AY374477ALT 5.677848
AY374477ALT_B 5.580151
AY374478 4.895544
AY374478_B 5.269247
AY374478ALT 4.97128
AY374478ALT_B 4.83674
AY374479 5.345981
AY374479_B 4.763606
AY374479ALT 5.430603
AY374479ALT_B 6.02415

Total number of rows: 41533

Table truncated, full table size 1137 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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