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Sample GSM325329 Query DataSets for GSM325329
Status Public on Apr 16, 2009
Title Gill
Sample type RNA
 
Source name Gill tissue of pufferfish
Organism Tetraodon nigroviridis
Characteristics Gill
Extracted molecule polyA RNA
Extraction protocol mRNA extraction and cDNA synthesis were done as described by Zhang et al., 2004 (PMID: 15588312)
Label Cy5 or Cy3
Label protocol cDNA labelling procedures were done as described by Zhang et al., 2004 (PMID: 15588312)
 
Hybridization protocol Hybridizations were carried out as described by Zhang et al., 2004 (PMID: 15588312)
Scan protocol Arrays were scanned on an Axon 4000A scanner and images quatified using GenePix
Description Gill tissue of pufferfish
Data processing Data was processed as described by Zhang et al., 2004 (PMID: 15588312) and dye-swapped replicates were averaged.
 
Submission date Sep 29, 2008
Last update date Apr 16, 2009
Contact name Esther T Chan
Organization name Celgene Corporation
Street address 1500 Owens Street, Suite 500
City San Francisco
State/province California
ZIP/Postal code 94158
Country USA
 
Platform ID GPL7401
Series (1)
GSE12976 Expression of known and predicted genes in tissues of Tetraodon nigroviridis (pufferfish)

Data table header descriptions
ID_REF Unique identifier
VALUE Arcsinh-transformed normalized intensity.

Data table
ID_REF VALUE
AY374473 6.246048
AY374473_B 6.235131
AY374473ALT 6.47744
AY374473ALT_B 6.046808
AY374474 5.949638
AY374474_B 5.92236
AY374475 5.435683
AY374475_B 5.025134
AY374477 6.08875
AY374477_B 5.672405
AY374477ALT 5.0123
AY374477ALT_B 5.159478
AY374478 3.837892
AY374478_B 4.480187
AY374478ALT 4.271627
AY374478ALT_B 4.136497
AY374479 5.234564
AY374479_B 5.037548
AY374479ALT 5.802367
AY374479ALT_B 6.755145

Total number of rows: 41533

Table truncated, full table size 1137 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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