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Sample GSM325332 Query DataSets for GSM325332
Status Public on Apr 16, 2009
Title Kidney
Sample type RNA
 
Source name Kidney tissue of pufferfish
Organism Tetraodon nigroviridis
Characteristics Kidney
Extracted molecule polyA RNA
Extraction protocol mRNA extraction and cDNA synthesis were done as described by Zhang et al., 2004 (PMID: 15588312)
Label Cy5 or Cy3
Label protocol cDNA labelling procedures were done as described by Zhang et al., 2004 (PMID: 15588312)
 
Hybridization protocol Hybridizations were carried out as described by Zhang et al., 2004 (PMID: 15588312)
Scan protocol Arrays were scanned on an Axon 4000A scanner and images quatified using GenePix
Description Kidney tissue of pufferfish
Data processing Data was processed as described by Zhang et al., 2004 (PMID: 15588312) and dye-swapped replicates were averaged.
 
Submission date Sep 29, 2008
Last update date Apr 16, 2009
Contact name Esther T Chan
Organization name Celgene Corporation
Street address 1500 Owens Street, Suite 500
City San Francisco
State/province California
ZIP/Postal code 94158
Country USA
 
Platform ID GPL7401
Series (1)
GSE12976 Expression of known and predicted genes in tissues of Tetraodon nigroviridis (pufferfish)

Data table header descriptions
ID_REF Unique identifier
VALUE Arcsinh-transformed normalized intensity.

Data table
ID_REF VALUE
AY374473 4.555027
AY374473_B 4.475713
AY374473ALT 5.093295
AY374473ALT_B 5.110103
AY374474 5.849443
AY374474_B 6.267738
AY374475 5.896554
AY374475_B 5.812584
AY374477 4.750408
AY374477_B 4.698279
AY374477ALT 4.617026
AY374477ALT_B 4.372725
AY374478 4.120399
AY374478_B 4.356469
AY374478ALT 4.016249
AY374478ALT_B 4.147314
AY374479 4.348115
AY374479_B 4.109179
AY374479ALT 4.558888
AY374479ALT_B 4.976072

Total number of rows: 41533

Table truncated, full table size 1137 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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