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Sample GSM33082 Query DataSets for GSM33082
Status Public on Dec 01, 2004
Title Mouse gld SCID 142
Sample type RNA
 
Channel 1
Source name gld SCID 142
Organism Mus musculus
Extracted molecule total RNA
 
Channel 2
Source name mouse hematopoetic tumor cell line common reference 2
Organism Mus musculus
Extracted molecule total RNA
 
 
Description mAdb experiment ID: 34394
FasL mutant mouse B cell lymphoma
Array Print: Mmad-03
 
Submission date Oct 22, 2004
Last update date May 27, 2005
Contact name Jeff X. Zhou
E-mail(s) jezhou@niaid.nih.gov
Phone 301 5942189
URL http://www.niaid.nih.gov/dir/labs/lip.htm
Organization name NIH
Department NIAID
Lab Laboratory of Immunopathology
Street address 5640 Fishers Lane
City Rockville
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL1517
Series (1)
GSE1908 NIAID Mouse Lymphoma Gene Expression Profiling

Data table header descriptions
ID_REF NCI mAdb well id plus replicate number
VALUE log ratio (log2 of PRE_VALUE)
PRE_VALUE Calibrated Ratio (Sample_target_source1 / Sample_target_source2 )
Slide_block Array block location
Slide_column Array column location
Slide_row Array row location
CH1_MEAN Sample 1 (Red Channel) mean Intensity (with background subtracted)
CH1_SD Sample 1 (Red Channel) Standard Deviation
CH1_BKD_MEAN Sample 1 (Red Channel) mean Background Level
CH1_BKD_SD Sample 1 (Red Channel) Background Standard Deviation
CH2_MEAN Sample 2 (Green Channel) mean Intensity (with background subtracted)
CH2_SD Sample 2 (Green Channel) Standard Deviation
CH2_BKD_MEAN Sample 2 (Green Channel) mean Background Level
CH2_BKD_SD Sample 2 (Green Channel) Background Standard Deviation
Flag rQuality flag measure

Data table
ID_REF VALUE PRE_VALUE Slide_block Slide_column Slide_row CH1_MEAN CH1_SD CH1_BKD_MEAN CH1_BKD_SD CH2_MEAN CH2_SD CH2_BKD_MEAN CH2_BKD_SD Flag
1080364_1 5.022 32.492 1 1 1 4795 1507 401 65 336 144 156 48 1
1080422_1 0.069 1.049 1 1 2 742 240 396 55 602 308 163 51 1
651641_1 -0.572 0.673 1 1 3 838 334 454 82 933 346 173 52 1
652023_1 -1.777 0.292 1 1 4 613 204 449 94 905 241 157 50 1
652405_1 -7.142 0.007 1 1 5 351 115 427 88 329 159 141 46 0.4
652787_1 -7.685 0.005 1 1 6 395 102 399 74 417 252 143 48 0.7
653169_1 -0.297 0.814 1 1 7 854 222 407 75 884 315 153 50 1
653515_1 -0.543 0.686 1 1 8 638 162 389 67 633 194 150 47 1
653897_1 -2.316 0.201 1 1 9 602 175 379 64 1611 448 133 39 1
654279_1 -0.592 0.663 1 1 10 1528 556 383 65 2432 621 135 40 1
654661_1 -1.115 0.462 1 1 11 1043 434 373 58 2064 741 133 41 1
655043_1 -0.463 0.725 1 1 12 1152 472 388 67 1542 544 140 43 1
655425_1 -6.675 0.010 1 1 13 376 162 393 68 284 129 148 44 0.4
655483_1 -0.763 0.589 1 1 14 1059 364 399 69 1631 418 140 44 1
655865_1 -1.313 0.402 1 1 15 756 270 402 84 1308 332 137 37 1
656247_1 -7.239 0.007 1 1 16 399 206 411 87 348 137 147 44 0.5
656629_1 -2.038 0.243 1 1 17 930 430 414 86 2968 1167 147 46 1
657011_1 -0.958 0.515 1 1 18 991 285 406 82 1672 446 159 53 1
657393_1 -2.290 0.204 1 1 19 428 178 379 66 471 176 152 51 0.9
657739_1 -0.426 0.744 1 1 20 1886 579 386 70 2828 888 146 50 1

Total number of rows: 14416

Table truncated, full table size 883 Kbytes.




Supplementary data files not provided
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