|
| Status |
Public on Dec 10, 2018 |
| Title |
MMTV-Neu.177754.Entinostat.6wk.expression |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
Whole Mouse Reference RNA
|
| Organism |
Mus musculus |
| Characteristics |
mouse RNA reference
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Qiagen Rneasy Kit
|
| Label |
Cy3
|
| Label protocol |
Agilent_mouse144k_barcode_25503 (manufacturer's protocol).
|
| |
|
| Channel 2 |
| Source name |
MMTV-Neu.177754.Entinostat.6wk.expression
|
| Organism |
Mus musculus |
| Characteristics |
sample type: MMTV/Neu
treatment: Entinostat_6wks
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Qiagen Rneasy Kit
|
| Label |
Cy5
|
| Label protocol |
Agilent_mouse144k_barcode_25503 (manufacturer's protocol).
|
| |
|
| |
| Hybridization protocol |
described in Hu et al., 2005, BioTechniques, 38:121-130
|
| Scan protocol |
Agilent Technologies Scanner Using Feature Extraction Software
|
| Description |
gene expression
|
| Data processing |
Data for both channels were Lowess-normalized and then log(2) ratio was taken
|
| |
|
| Submission date |
Aug 17, 2018 |
| Last update date |
Dec 10, 2018 |
| Contact name |
Charles M. Perou |
| E-mail(s) |
cperou@med.unc.edu
|
| Organization name |
University of North Carolina at Chapel Hill
|
| Department |
Professor of Genetics, and Pathology & Laboratory Medicine; Lineberger Comprehensive Cancer Center
|
| Street address |
12-044 Lineberger Comprehensive Cancer Center CB# 7295
|
| City |
Chapel Hill |
| State/province |
NC |
| ZIP/Postal code |
27599-7264 |
| Country |
USA |
| |
|
| Platform ID |
GPL11383 |
| Series (2) |
| GSE118728 |
Identification of Jun loss that promotes resistance to HDAC inhibitor Entinostat through Myc signaling in Luminal breast cancer (expression) |
| GSE118744 |
Identification of Jun loss that promotes resistance to HDAC inhibitor Entinostat through Myc signaling in Luminal breast cancer |
|
