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Sample GSM344972 Query DataSets for GSM344972
Status Public on Mar 01, 2009
Title 5-Aza-CdR D1 A-rep1,rep2
Sample type RNA
 
Source name MCF7 Cells
Organism Homo sapiens
Characteristics MCF7 Cells treated with 1 uM 5-Aza-CdR and harvested after 24 h
Extracted molecule total RNA
Extraction protocol Qiagen RNAEasy Kit
Label Cy3
Label protocol According to Illumina protocol
 
Hybridization protocol According to Illumina protocol
Scan protocol According to Illumina protocol
Description The data was processed using beadstudio which averaged the two raw data files. There is no normalization.
Data processing The data was processed using Illumina Beadstudio which averaged the two raw data files. There is no normalization.
 
Submission date Nov 25, 2008
Last update date Dec 03, 2008
Contact name Tina Miranda
E-mail(s) tina.miranda@usc.edu
Organization name USC
Street address 1441 Eastlake Ave
City Los Angeles
State/province CA
ZIP/Postal code 90033
Country USA
 
Platform ID GPL6884
Series (1)
GSE13733 Effects of DZNep and 5-Aza-CdR on gene expression in MCF7 cells

Data table header descriptions
ID_REF
VALUE Signal

Data table
ID_REF VALUE
ILMN_1762337 77.3
ILMN_2055271 81.2
ILMN_1736007 66.2
ILMN_2383229 72.7
ILMN_1806310 68.5
ILMN_1779670 87.2
ILMN_2321282 71.6
ILMN_1671474 71.2
ILMN_1772582 60.1
ILMN_1735698 82.7
ILMN_1653355 90.6
ILMN_1717783 56.6
ILMN_1705025 66.4
ILMN_1814316 69
ILMN_2359168 67.5
ILMN_1731507 53.4
ILMN_1787689 56.4
ILMN_1745607 53.8
ILMN_2136495 63
ILMN_1668111 58.1

Total number of rows: 48803

Table truncated, full table size 863 Kbytes.




Supplementary file Size Download File type/resource
GSM344972.csv.gz 287.3 Kb (ftp)(http) CSV
GSM344972_1.csv.gz 286.3 Kb (ftp)(http) CSV
Processed data included within Sample table

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