NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM363995 Query DataSets for GSM363995
Status Public on Mar 09, 2009
Title A/J A-J_68-9
Sample type RNA
 
Source name A-J_68-9
Organism Mus musculus
Characteristics Hematopoietic stem/progenitor cells
Extracted molecule polyA RNA
Extraction protocol Trizol LS
Label biotin
Label protocol IVT (see manuscript)
 
Hybridization protocol The samples were applied to MouseWG-6 v1.1 Expression Beadchips and hybridized at 58C for 16-20 hours at high humidity. (See manuscript)
Scan protocol Arrays were scanned on an Illumina BeadArray Reader. (See manuscript)
Description Hematopoietic stem/progenitor cells
Data processing quantile normalization
 
Submission date Jan 23, 2009
Last update date Mar 03, 2009
Contact name Patrick Cahan
E-mail(s) patrick.cahan@jhmi.edu
Organization name Johns Hopkins University School of Medicine
Department ICE and Biomedical Engineering
Lab Cahan Lab
Street address 733 North Broadway, MRB 653
City Baltimore
State/province MD
ZIP/Postal code 21205
Country USA
 
Platform ID GPL8081
Series (1)
GSE10656 The impact of copy number variation on local gene expression in mouse hematopoietic stem and progenitor cells

Data table header descriptions
ID_REF ID
VALUE quantile-normalized signal intensity
raw pre-normalization signal intensity

Data table
ID_REF VALUE raw
103290575 79.6916 67.7000
2120066 101.9729 84.8000
101740324 87.6437 73.8000
4050095 93.9375 78.5000
1230711 67.2666 58.4000
105860348 83.3354 70.5000
100450072 76.4729 65.3000
3610402 84.6750 71.5000
6110315 87.5145 73.7000
4280670 83.4708 70.6000
2370731 208.4312 159.1000
4200092 69.6479 60.2000
2060546 56.5020 48.2000
106200670 161.5916 125.5000
6110519 81.5187 69.1000
1690441 77.1375 65.8000
101450128 136.0187 108.5000
3190731 198.4729 152.0000
101230164 73.7229 63.3000
3870347 86.7375 73.1000

Total number of rows: 46629

Table truncated, full table size 1172 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap