|
| Status |
Public on Mar 16, 2019 |
| Title |
Chinese horse breeds_Series 99: CK40 |
| Sample type |
genomic |
| |
|
| Source name |
Chakouyi horse
|
| Organism |
Equus caballus |
| Characteristics |
gender: unknown
tissue: blood
age: 3 years
|
| Treatment protocol |
The samples were obtained following the principles approved by the Animal Care and Use Committee of China Agricultural University (Permit Number: XK257)
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Extraction of genomic DNA from fresh frozen tissue was performed using proteinase K and repeated phenol-chloroform extraction. Integrity and purity of DNA verified by agarose gel electrophoresis and A260/280 ratio.
|
| Label |
not provided
|
| Label protocol |
Not provided
|
| |
|
| Hybridization protocol |
Not provided
|
| Scan protocol |
After allele-specific staining BeadChip arrays and scanned on Illumina BeadScand..
|
| Description |
Genomic DNA extracted from blood was genotyped with the Illumina Equine SNP70 Bead Array
|
| Data processing |
Genomic DNA extracted from blood was genotyped using the Illumina Equine SNP70 Bead Array.
Image data was analyzed using GenomeStudio Software.
|
| |
|
| Submission date |
Mar 15, 2019 |
| Last update date |
Mar 16, 2019 |
| Contact name |
Hongying Ma |
| E-mail(s) |
mhying7916@163.com
|
| Organization name |
China agriculture university
|
| Street address |
yuanmingyuan road NO.2
|
| City |
Beijing |
| ZIP/Postal code |
100193 |
| Country |
China |
| |
|
| Platform ID |
GPL26309 |
| Series (2) |
| GSE128372 |
Genome-wide SNP data of Chinese indigenous horse breed (264 Chinese horse breeds) |
| GSE128376 |
Genome-wide SNP data of Chinese indigenous horse breed |
|
