NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM3678191 Query DataSets for GSM3678191
Status Public on Mar 19, 2019
Title HC6
Sample type RNA
 
Source name Serum exosome
Organism Homo sapiens
Characteristics disease: healthy controls
gender: Female
age: 72
Extracted molecule total RNA
Extraction protocol Exosomes were isolated using the ExoQuick exosome precipitation kit and total RNA was extracted from cells using miRNesy mini kit (Qiagen).
Label Cy5
Label protocol Extracted total RNA was labeled with Cy5 using the 3D-Gene miRNA labeling kit (Toray, Kamakura, Japan)
 
Hybridization protocol Hybridized for 16 h at 32 C with rotary shake (250 rpm). Hybridization buffer and washing protocol was followed by the protocol supplied by TORAY Industries, Inc..
Scan protocol 3D-Gene Scanner ((Toray Industries Inc., Tokyo, Japan) was used for scanning. Images were quantified using Extraction(Toray Industries Inc., Tokyo, Japan).
Data processing The raw data of each spot was normalized by substitution with a mean intensity of the background signal determined by all blank spots’ signal intensities of 95% confidence intervals.
 
Submission date Mar 19, 2019
Last update date Mar 19, 2019
Contact name Satoshi Kondo
Organization name Toray Industries,Inc.
Street address 10-1 tebiro 6-chome
City Kamakura
State/province Kanagawa
ZIP/Postal code 248-8555
Country Japan
 
Platform ID GPL21263
Series (1)
GSE128508 Comprehensive analysis of exosomal miRNA in type 1 autoimmune pancreatitis

Data table header descriptions
ID_REF
VALUE Normalized signal intensity

Data table
ID_REF VALUE
MIMAT0000062 29
MIMAT0000063 10
MIMAT0000064 null
MIMAT0000065 null
MIMAT0000066 null
MIMAT0000067 null
MIMAT0000068 null
MIMAT0000069 23
MIMAT0000070 4
MIMAT0000071 null
MIMAT0000072 null
MIMAT0000073 null
MIMAT0000074 null
MIMAT0000075 null
MIMAT0000076 null
MIMAT0000077 null
MIMAT0000078 3
MIMAT0000079 12
MIMAT0000080 70
MIMAT0000081 null

Total number of rows: 2565

Table truncated, full table size 44 Kbytes.




Supplementary file Size Download File type/resource
GSM3678191_SH63705_Cell1.txt.gz 64.3 Kb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap