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Sample GSM3686 Query DataSets for GSM3686
Status Public on Jun 14, 2003
Title CD4+CD25+ spleen
Sample type SAGE
Anchor NlaIII
Tag Count 20041
Tag Length 10
 
Source name CD4+CD25+ spleen cells
Organism Mus musculus
Extracted molecule total RNA
 
Description CD4+CD25+ T cells were purified from naive CBA/Ca mouse spleen cells by MACS sorting. cDNA was preamplified (SMART) before SAGE analysis.
 
Submission date Jan 15, 2003
Last update date Nov 19, 2008
Contact name Steve Cobbold
E-mail(s) stephen.cobbold@path.ox.ac.uk
Phone +44-(0)1865-275504
Fax +44-(0)1865-275501
URL http://www.molbiol.ox.ac.uk/pathology/tig/welcome.html
Organization name University of Oxford
Department Sir William Dunn School of Pathology
Lab Therapeutic Immunology Group
Street address South Parks Road
City Oxford
State/province Oxfordshire
ZIP/Postal code OX1 3RE
Country United Kingdom
 
Platform ID GPL11
Series (2)
GSE206 CD4/CD25 subsets of mouse spleen
GSE1316 IL-10-conditioned dendritic cells elicit innate inflammatory gene products in response to danger signals

Data table header descriptions
TAG 10 base pair SAGE Tag
COUNT Absolute count of each Tag in library
TPM tags per million

Data table
TAG COUNT TPM
GAAAATGAGA 788 39319.40
GTGACCACGG 151 7534.55
GTGGCTCACA 95 4740.28
AACGAGGAAT 74 3692.43
AACACTTGGA 70 3492.84
GCCACCGTCC 60 2993.86
TGGAAGAAAG 57 2844.17
CCTTTAATCC 56 2794.27
TCCTACAGTG 56 2794.27
CACAAACGGT 54 2694.48
CCGACGGGCG 48 2395.09
CACCACCACC 46 2295.29
CCAAAAAAAA 37 1846.22
AAGATCAAGA 35 1746.42
GAAAATGATA 34 1696.52
AAAACAGTGG 32 1596.73
AAGAGGCAAG 31 1546.83
AGAGCGAAGT 31 1546.83
AGGAAGGCGG 30 1496.93
GCCTCAGTTC 30 1496.93

Total number of rows: 13016

Table truncated, full table size 242 Kbytes.




Supplementary data files not provided
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