GEO help: Mouse over screen elements for information.
Status
Public on Mar 02, 2005
Title
HEK293T cells, forskolin 1hr 1
Sample type
RNA
Source name
Human HEK293T cell line
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Culture of human HEK293T cells, treated with forskolin for 0hr, 1hr and 4 hr. RNA was extracted using the Qiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA. Duplicates for each time point is used. Data was analyzed using dChIP software (www.dchip.org). Keywords = HEK293T, cAMP induced genes, forskolin, CREB target genes
Submission date
Dec 10, 2004
Last update date
May 27, 2005
Contact name
Xinmin Zhang
E-mail(s)
xzhang@salk.edu
Phone
858-453-4100 x1157
Organization name
Salk Institute
Street address
10010 N. Torrey Pines Rd.
City
La Jolla
State/province
CA
ZIP/Postal code
92037
Country
USA
Platform ID
GPL96
Series (1)
GSE2060
Characterize CREB target genes in different tissue types
Data table header descriptions
ID_REF
VALUE
'expression index' a measure of the abundance of a transcript, determined using the dChip software with PM-MM models.
Data table
ID_REF
VALUE
AFFX-BioB-5_at
66.427
AFFX-BioB-M_at
54.8829
AFFX-BioB-3_at
73.4973
AFFX-BioC-5_at
308.323
AFFX-BioC-3_at
106.088
AFFX-BioDn-5_at
142.038
AFFX-BioDn-3_at
763.724
AFFX-CreX-5_at
1516.19
AFFX-CreX-3_at
2360.56
AFFX-DapX-5_at
113.135
AFFX-DapX-M_at
48.9554
AFFX-DapX-3_at
189.999
AFFX-LysX-5_at
20.9233
AFFX-LysX-M_at
142.779
AFFX-LysX-3_at
81.6371
AFFX-PheX-5_at
69.9817
AFFX-PheX-M_at
309.828
AFFX-PheX-3_at
169.703
AFFX-ThrX-5_at
69.195
AFFX-ThrX-M_at
39.7183
Total number of rows: 22283 Table truncated, full table size 410 Kbytes .Supplementary file
Size
Download
File type/resource
GSM37493.CEL.gz
3.7 Mb
(ftp) (http)
CEL
GSM37493.EXP.gz
258 b
(ftp) (http)
EXP