GEO help: Mouse over screen elements for information.
Status
Public on Mar 02, 2005
Title
HEK293T cells, forskolin 4hr 1
Sample type
RNA
Source name
Human HEK293T cell line
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Culture of human HEK293T cells, treated with forskolin for 0hr, 1hr and 4 hr. RNA was extracted using the Qiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA. Duplicates for each time point is used. Data was analyzed using dChIP software (www.dchip.org). Keywords = HEK293T, cAMP induced genes, forskolin, CREB target genes
Submission date
Dec 10, 2004
Last update date
May 27, 2005
Contact name
Xinmin Zhang
E-mail(s)
xzhang@salk.edu
Phone
858-453-4100 x1157
Organization name
Salk Institute
Street address
10010 N. Torrey Pines Rd.
City
La Jolla
State/province
CA
ZIP/Postal code
92037
Country
USA
Platform ID
GPL96
Series (1)
GSE2060
Characterize CREB target genes in different tissue types
Data table header descriptions
ID_REF
VALUE
'expression index' a measure of the abundance of a transcript, determined using the dChip software with PM-MM models.
Data table
ID_REF
VALUE
AFFX-BioB-5_at
76.6142
AFFX-BioB-M_at
52.5109
AFFX-BioB-3_at
90.1308
AFFX-BioC-5_at
346.491
AFFX-BioC-3_at
89.0249
AFFX-BioDn-5_at
132.4
AFFX-BioDn-3_at
1030.78
AFFX-CreX-5_at
1940.85
AFFX-CreX-3_at
3360.47
AFFX-DapX-5_at
110.053
AFFX-DapX-M_at
64.0836
AFFX-DapX-3_at
270.739
AFFX-LysX-5_at
14.4176
AFFX-LysX-M_at
155.97
AFFX-LysX-3_at
107.543
AFFX-PheX-5_at
59.6561
AFFX-PheX-M_at
361.989
AFFX-PheX-3_at
118.93
AFFX-ThrX-5_at
54.2966
AFFX-ThrX-M_at
24.0246
Total number of rows: 22283 Table truncated, full table size 409 Kbytes .Supplementary file
Size
Download
File type/resource
GSM37495.CEL.gz
3.7 Mb
(ftp) (http)
CEL
GSM37495.EXP.gz
258 b
(ftp) (http)
EXP