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Sample GSM375451 Query DataSets for GSM375451
Status Public on Sep 25, 2009
Title cerebralcortex_e15_3
Sample type SAGE
Anchor NlaIII
Tag Count 44332
Tag Length 10
 
Source name Cerebral cortex, E15.5
Organism Mus musculus
Characteristics strain: C57BL/6
gender: Unknown
age: E15.5 (embryonic day)
tissue: Cerebral cortex
condition: Normal mouse embryo
Extracted molecule total RNA
Extraction protocol Total RNA was extracted by using RNeasy® Lipid Tissue Mini Kit (Qiagen) according to the manufacturer's protocol.
 
Description Library was constructed by using original 3' short SAGE protocol as reported in Gunnersen et al., 2002. Global analysis of gene expression patterns in developing mouse neocortex using serial analysis of gene expression. Molecular and cellular neurosciences, 19(4):560-573.
 
Submission date Feb 26, 2009
Last update date Sep 25, 2009
Contact name King Hwa Ling
E-mail(s) khling@medic.upm.edu.my, michael.khling@yahoo.com
Organization name Universiti Putra Malaysia
Department Department of Obstetrics and Gynaecology
Lab Clinical Genetics Unit
Street address Faculty of Medicine and Health Sciences
City UPM Serdang
State/province Selangor Darul Ehsan
ZIP/Postal code 43400
Country Malaysia
 
Platform ID GPL11
Series (1)
GSE15031 Profiling of spatio-temporally regulated transcripts during cerebral corticogenesis in the mouse

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
aaaaaaaaaa 58 1308.31
aaaaaaaaga 1 22.56
aaaaaaacct 1 22.56
aaaaaaacta 1 22.56
aaaaaaatag 1 22.56
aaaaaacggt 1 22.56
aaaaaagcaa 1 22.56
aaaaaagtga 2 45.11
aaaaaataaa 1 22.56
aaaaaataga 1 22.56
aaaaaattga 7 157.90
aaaaacaaaa 5 112.79
aaaaacaagt 1 22.56
aaaaacaggt 1 22.56
aaaaacatct 1 22.56
aaaaactgaa 1 22.56
aaaaagcaca 1 22.56
aaaaagcctc 1 22.56
aaaaagcgaa 3 67.67
aaaaaggagg 1 22.56

Total number of rows: 15787

Table truncated, full table size 295 Kbytes.




Supplementary data files not provided

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