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Sample GSM375463 Query DataSets for GSM375463
Status Public on Sep 25, 2009
Title cerebralcortex_adult_6
Sample type SAGE
Anchor NlaIII
Tag Count 69084
Tag Length 17
 
Source name Right hemisphere of the cerebral cortex, Adult
Organism Mus musculus
Characteristics strain: C57BL/6
gender: Female
age: 6 months
tissue: Right hemisphere of the cerebral cortex
condition: Normal adult mouse
Extracted molecule total RNA
Extraction protocol Total RNA was extracted by using RNeasy® Lipid Tissue Midi Kit (Qiagen) according to the manufacturer's protocol.
 
Description Library was constructed by using original 3' long SAGE protocol according to Saha et al., 2002. Using the transcriptome to annotate the genome. Nature biotechnology, 20(5):508-512.
 
Submission date Feb 26, 2009
Last update date Sep 25, 2009
Contact name King Hwa Ling
E-mail(s) khling@medic.upm.edu.my, michael.khling@yahoo.com
Organization name Universiti Putra Malaysia
Department Department of Obstetrics and Gynaecology
Lab Clinical Genetics Unit
Street address Faculty of Medicine and Health Sciences
City UPM Serdang
State/province Selangor Darul Ehsan
ZIP/Postal code 43400
Country Malaysia
 
Platform ID GPL1349
Series (1)
GSE15031 Profiling of spatio-temporally regulated transcripts during cerebral corticogenesis in the mouse

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
aaaaaaaaaaaaaaaaa 40 579.01
aaaaaaaaaaaaaaaac 1 14.48
aaaaaaaaaaaaaaaag 4 57.90
aaaaaaaaaaaaaaaat 2 28.95
aaaaaaaaaaaaaaaga 2 28.95
aaaaaaaaaaaaaaata 1 14.48
aaaaaaaaaacagcaaa 1 14.48
aaaaaaaaaagaaaaaa 1 14.48
aaaaaaaaagaaaaaaa 1 14.48
aaaaaaaaagaaaaaag 1 14.48
aaaaaaaaatgggttca 3 43.43
aaaaaaaagaaaaaaaa 1 14.48
aaaaaaaatgaacacag 1 14.48
aaaaaaagaaaaaaaaa 1 14.48
aaaaaaagaaagaaaaa 1 14.48
aaaaaaataaaaatccc 2 28.95
aaaaaaatagtcaataa 1 14.48
aaaaaaattatgccaag 1 14.48
aaaaaacaaaacaacac 1 14.48
aaaaaacacattttaat 1 14.48

Total number of rows: 33652

Table truncated, full table size 856 Kbytes.




Supplementary data files not provided

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