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Sample GSM378002 Query DataSets for GSM378002
Status Public on Mar 06, 2009
Title NCI-H23
Sample type RNA
 
Source name Lung:NSCLC
Organism Homo sapiens
Characteristics cell line: NCI-H23
tissue: Lung:NSCLC
k-ras dependence: independent
Extracted molecule total RNA
Extraction protocol Qiagen RNA easy kit
Label biotin
Label protocol Biotinylation of RNA with Perkin Elmer PN Biotin-11-UTP, and Biotin-11-CTP)
 
Hybridization protocol Labelled RNA was processed using a protocol from Affymetrix's GeneChip Expression Analysis Technical Manual under Eukaryotic Sample and Array Processing
Scan protocol Scanning was performed with an Affymetrix GeneChip 3000 Scanner
Description Gene expression data
Data processing Data was processed with GCOS ver 1.4
 
Submission date Mar 05, 2009
Last update date Mar 05, 2009
Contact name Patricia Greninger
E-mail(s) pgreninger@partners.org
Organization name Massachusetts General Hospital Cancer Center
Department Center for Molecular Therapeutics
Lab Settleman Lab
Street address 149 13th St
City Charlestown
State/province MA
ZIP/Postal code 02129
Country USA
 
Platform ID GPL1352
Series (1)
GSE15126 A gene expression signature associated with K-Ras addiction reveals regulators of EMT and tumor cell survival

Data table header descriptions
ID_REF
VALUE log2 GCRMA normalized values

Data table
ID_REF VALUE
1053_3p_at 9.01039
117_3p_at 4.01221
1494_3p_f_at 1.96793
1552275_3p_s_at 5.52625
1552281_3p_at 2.47736
1552296_3p_at 2.56656
1552302_3p_at 4.01078
1552311_3p_a_at 3.16944
1552321_3p_a_at 2.48012
1552340_3p_at 2.15416
1552343_3p_s_at 4.83776
1552354_3p_at 2.46536
1552476_3p_s_at 2.17471
1552480_3p_s_at 2.86796
1552504_3p_a_at 2.34392
1552518_3p_s_at 4.32922
1552528_3p_at 2.00243
1552535_3p_at 2.22573
1552566_3p_at 1.91227
1552575_3p_a_at 3.05553

Total number of rows: 52920

Table truncated, full table size 1417 Kbytes.




Supplementary file Size Download File type/resource
GSM378002.CEL.gz 4.5 Mb (ftp)(http) CEL
GSM378002.txt.gz 350.3 Kb (ftp)(http) TXT
Processed data included within Sample table

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