NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM378012 Query DataSets for GSM378012
Status Public on Mar 06, 2009
Title SNG-M
Sample type RNA
 
Source name Uterus
Organism Homo sapiens
Characteristics cell line: SNG-M
tissue: Uterus
k-ras dependence: not tested
Extracted molecule total RNA
Extraction protocol Qiagen RNA easy kit
Label biotin
Label protocol Biotinylation of RNA with Perkin Elmer PN Biotin-11-UTP, and Biotin-11-CTP)
 
Hybridization protocol Labelled RNA was processed using a protocol from Affymetrix's GeneChip Expression Analysis Technical Manual under Eukaryotic Sample and Array Processing
Scan protocol Scanning was performed with an Affymetrix GeneChip 3000 Scanner
Description Gene expression data
Data processing Data was processed with GCOS ver 1.4
 
Submission date Mar 05, 2009
Last update date Mar 05, 2009
Contact name Patricia Greninger
E-mail(s) pgreninger@partners.org
Organization name Massachusetts General Hospital Cancer Center
Department Center for Molecular Therapeutics
Lab Settleman Lab
Street address 149 13th St
City Charlestown
State/province MA
ZIP/Postal code 02129
Country USA
 
Platform ID GPL1352
Series (1)
GSE15126 A gene expression signature associated with K-Ras addiction reveals regulators of EMT and tumor cell survival

Data table header descriptions
ID_REF
VALUE log2 GCRMA normalized values

Data table
ID_REF VALUE
1053_3p_at 8.9684
117_3p_at 2.5311
1494_3p_f_at 1.98244
1552275_3p_s_at 2.68686
1552281_3p_at 2.49004
1552296_3p_at 2.58417
1552302_3p_at 4.14318
1552311_3p_a_at 3.31425
1552321_3p_a_at 2.57336
1552340_3p_at 2.17894
1552343_3p_s_at 5.6305
1552354_3p_at 2.54208
1552476_3p_s_at 2.18271
1552480_3p_s_at 3.01734
1552504_3p_a_at 2.36592
1552518_3p_s_at 4.14862
1552528_3p_at 2.11807
1552535_3p_at 2.26989
1552566_3p_at 4.67714
1552575_3p_a_at 3.04264

Total number of rows: 52920

Table truncated, full table size 1417 Kbytes.




Supplementary file Size Download File type/resource
GSM378012.CEL.gz 4.1 Mb (ftp)(http) CEL
GSM378012.txt.gz 351.6 Kb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap