|
| Status |
Public on Jul 29, 2019 |
| Title |
neonate_ART_Donor_135 |
| Sample type |
genomic |
| |
|
| Source name |
ART_Donor_135
|
| Organism |
Homo sapiens |
| Characteristics |
gender: F
sample type: Guthrie blood spot
art status: ART
art subtype: GIFT
time of collection: birth
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA was extracted using the Zymo Research ZR DNA-Card Extraction Kit following manufacturer protocol
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium MethylationEPIC Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Description |
guthrie blood spot from ART conceived individual
|
| Data processing |
BeadStudio software v3.2
matrix processed includes: Normalized (SWAN) Average Beta and detP
matrix signal intensities includes: The Methylated and unmethylated signal intensities and detP
|
| |
|
| Submission date |
May 17, 2019 |
| Last update date |
Mar 20, 2023 |
| Contact name |
Boris Novakovic |
| E-mail(s) |
boris.novakovic@mcri.edu.au
|
| Phone |
0434980073
|
| Organization name |
Murdoch Children's Research Institute
|
| Street address |
Murdoch Children's Research Institute, Royal Children's Hospital, Flemington Road
|
| City |
Parkville |
| State/province |
Victoria |
| ZIP/Postal code |
3052 |
| Country |
Australia |
| |
|
| Platform ID |
GPL21145 |
| Series (1) |
| GSE131433 |
Epigenome-wide Association study of individuals conceived by Assisted Reproduction Technologies at birth and adulthood |
|
