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GEO accession:
Sample GSM380313
Query DataSets for GSM380313
Status
Public on Jun 01, 2009
Title
TAF4b knockout 3
Sample type
RNA
Source name
TAF4b knockout
Organism
Mus musculus
Characteristics
genotype: TAF4b knockout
Extracted molecule
total RNA
Extraction protocol
RNA was isolated using Trizol reagent
Label
biotin
Label protocol
Affymetrix Whole-transcript Sense Target Labeling Assay (Rev3)
Hybridization protocol
per instructions of GeneChip Mouse gene 1.0 ST array
Scan protocol
Affymetrix Expression Console v1.1
Description
n/a
Data processing
RMA-sketch
Submission date
Mar 13, 2009
Last update date
Mar 13, 2009
Contact name
Lindsay Lovasco
E-mail(s)
lindsay_lovasco@brown.edu
Organization name
Brown University
Department
MCB
Lab
Freiman Lab
Street address
70 Ship St.
City
Providence
State/province
RI
ZIP/Postal code
02903
Country
USA
Platform ID
GPL6246
Series (1)
GSE15228
Gene expression differences between TAF4b-KO, Het and WT ovaries at 3 weeks of age
Data table header descriptions
ID_REF
VALUE
RMA signal
Data table
ID_REF
VALUE
10344614
78.88876
10344616
5.993228
10344620
14.66013
10344622
146.8652
10344624
1031.277
10344633
1371.547
10344637
345.3678
10344653
21.11593
10344658
537.1295
10344674
14.0225
10344679
41.03141
10344707
449.7691
10344713
2825.588
10344715
13.67116
10344717
30.78458
10344719
65.36028
10344721
6.164738
10344723
1238.214
10344725
351.8602
10344741
3660.875
Total number of rows:
28266
Table truncated, full table size
493 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM380313.CEL.gz
4.2 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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