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Sample GSM38247

Query DataSets for GSM38247

Status

Public on Jul 01, 2005

Title

SHR20-1

Sample type

RNA

Source name

Rat left ventricle

Organism

Rattus norvegicus

Extracted molecule

total RNA

Description

Left ventricular gene expression profiles from 12-, 16- and 20-months old spontaneously hypertensive rats (SHRs) were compared with left ventricular profiles seen in age-matched Wistar-Kyoto (WKY) rats by screening Affymetrix U34A arrays (there are 4 samples in each timepoint except 3 samples of 20-months old WKYs).
Keywords = heart
Keywords = microarray
Keywords = SHR
Keywords = heart failure

Submission date

Dec 29, 2004

Last update date

May 29, 2005

Contact name

Jaana Rysä

E-mail(s)

jaana.rysa@oulu.fi

Phone

+358-8-5375262

Organization name

University of Oulu

Department

Pharmacology and toxicology

Street address

PO BOX 5000

City

University of OULU

ZIP/Postal code

90014

Country

Finland

Platform ID

GPL85

Series (1)

GSE2116

SHR-WKY

Data table header descriptions
ID_REF
VALUE	"Signal" as a measure of the abundance of a transcript
ABS_CALL	the call in an absolute analysis that indicates if the transcript was present (P), absent (A) or marginal (M).
DETECTION P-VALUE	p-value that indicates the significance level of detection call

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-MurIL2_at	2.4	A	0.772364
AFFX-MurIL10_at	1.8	A	0.724854
AFFX-MurIL4_at	0.9	A	0.645547
AFFX-MurFAS_at	1.1	A	0.617401
AFFX-BioB-5_at	31	P	0.039661
AFFX-BioB-M_at	49.5	P	0.003212
AFFX-BioB-3_at	40.8	P	0.026111
AFFX-BioC-5_at	141.9	P	0.000169
AFFX-BioC-3_at	86.6	P	0.00007
AFFX-BioDn-5_at	94.2	P	0.002556
AFFX-BioDn-3_at	671.8	P	0.000225
AFFX-CreX-5_at	972	P	0.000044
AFFX-CreX-3_at	1485.2	P	0.000044
AFFX-BioB-5_st	20.2	A	0.089478
AFFX-BioB-M_st	16.7	A	0.368438
AFFX-BioB-3_st	2.4	A	0.957038
AFFX-BioC-5_st	1.8	A	0.941556
AFFX-BioC-3_st	0.7	A	0.824672
AFFX-BioDn-5_st	7.9	A	0.368438
AFFX-BioDn-3_st	11	A	0.275146

Total number of rows: 8799

Table truncated, full table size 246 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM38247.CEL.gz	1.9 Mb	(ftp)(http)	CEL
GSM38247.EXP.gz	529 b	(ftp)(http)	EXP