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Sample GSM38257

Query DataSets for GSM38257

Status

Public on Jul 01, 2005

Title

WKY16-3

Sample type

RNA

Source name

Rat left ventricle

Organism

Rattus norvegicus

Extracted molecule

total RNA

Description

Left ventricular gene expression profiles from 12-, 16- and 20-months old spontaneously hypertensive rats (SHRs) were compared with left ventricular profiles seen in age-matched Wistar-Kyoto (WKY) rats by screening Affymetrix U34A arrays (there are 4 samples in each timepoint except 3 samples of 20-months old WKYs).
Keywords = heart
Keywords = microarray
Keywords = SHR
Keywords = heart failure

Submission date

Dec 29, 2004

Last update date

May 29, 2005

Contact name

Jaana Rysä

E-mail(s)

jaana.rysa@oulu.fi

Phone

+358-8-5375262

Organization name

University of Oulu

Department

Pharmacology and toxicology

Street address

PO BOX 5000

City

University of OULU

ZIP/Postal code

90014

Country

Finland

Platform ID

GPL85

Series (1)

GSE2116

SHR-WKY

Data table header descriptions
ID_REF
VALUE	"Signal" as a measure of the abundance of a transcript
ABS_CALL	the call in an absolute analysis that indicates if the transcript was present (P), absent (A) or marginal (M).
DETECTION P-VALUE	p-value that indicates the significance level of detection call

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-MurIL2_at	0.9	A	0.916408
AFFX-MurIL10_at	0.7	A	0.760937
AFFX-MurIL4_at	2.3	A	0.287743
AFFX-MurFAS_at	1.5	A	0.737173
AFFX-BioB-5_at	33.7	P	0.020022
AFFX-BioB-M_at	56.5	P	0.006187
AFFX-BioB-3_at	42.4	P	0.01667
AFFX-BioC-5_at	136.3	P	0.00011
AFFX-BioC-3_at	90.7	P	0.00007
AFFX-BioDn-5_at	96.1	P	0.003595
AFFX-BioDn-3_at	764.8	P	0.000081
AFFX-CreX-5_at	1014.9	P	0.000044
AFFX-CreX-3_at	1458.4	P	0.000044
AFFX-BioB-5_st	20.8	A	0.185131
AFFX-BioB-M_st	17.6	A	0.205732
AFFX-BioB-3_st	2.8	A	0.897835
AFFX-BioC-5_st	2.2	A	0.921998
AFFX-BioC-3_st	0.4	A	0.9273
AFFX-BioDn-5_st	17.1	A	0.275146
AFFX-BioDn-3_st	17.2	A	0.123572

Total number of rows: 8799

Table truncated, full table size 245 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM38257.CEL.gz	1.9 Mb	(ftp)(http)	CEL
GSM38257.EXP.gz	532 b	(ftp)(http)	EXP