GEO help: Mouse over screen elements for information.
Status
Public on Mar 20, 2009
Title
SAGE_Brain_glioblastoma_B_H833
Sample type
SAGE
Anchor
NlaIII
Tag Count
100600
Tag Length
10
Source name
brain, glioblastoma multiforme, bulk, short sage, adult, male
Organism
Homo sapiens
Characteristics
organ/tissue: brain tissue preparation: bulk age: 78 yrs sex: male cell type: Glioblastoma
Biomaterial provider
Duke Tissue Bank
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 356 Tagging_enzyme: BsmF I Library_producer: Jennfier B. Edwards Laboratory: Gregory Riggins, Duke University Medical Center References: K Boon et al., BMC Cancer 4, 39 [PUBMED=15265232]
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL4
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15309
Cancer Genome Anatomy Project (CGAP) Human SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
104
1033.80
AAAAAAAAAT
2
19.88
AAAAAAAAGA
3
29.82
AAAAAAAATC
1
9.94
AAAAAAAATG
2
19.88
AAAAAAAGCT
1
9.94
AAAAAAAGGA
1
9.94
AAAAAAATAA
1
9.94
AAAAAAATCA
5
49.70
AAAAAAATTA
1
9.94
AAAAAACAAA
1
9.94
AAAAAACAGC
1
9.94
AAAAAACCCA
17
168.99
AAAAAACTAC
2
19.88
AAAAAACTCA
1
9.94
AAAAAACTCC
1
9.94
AAAAAACTGC
1
9.94
AAAAAAGAAA
1
9.94
AAAAAAGACA
1
9.94
AAAAAAGAGA
2
19.88
Total number of rows: 34143 Table truncated, full table size 612 Kbytes .Supplementary data files not provided