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| Status |
Public on Mar 20, 2009 |
| Title |
SAGE_GallBladder_Normal_B_HN |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
85706 |
| Tag Length |
10 |
| |
|
| Source name |
gall bladder, bulk, ventral body wall, normal, adult, female, extracted short sage
|
| Organism |
Homo sapiens |
| Characteristics |
organ/tissue: other
tissue preparation: bulk
age: 67
sex: female
cell type: ventral body wall
|
| Biomaterial provider |
Dr. Alejandro Corvalan
|
| Extracted molecule |
total RNA |
| Extraction protocol |
N/A
|
| |
|
| Description |
CGAP_Numeric_library_ID: 2128
Tagging_enzyme: Mme I
Library_producer: Dr. Hector Alvarez
Laboratory: Dr. Gregory Riggins and Dr. Anirban Maitra
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| |
|
| Submission date |
Mar 19, 2009 |
| Last update date |
Mar 20, 2009 |
| Contact name |
Cancer Genome Anatomy Project CGAP |
| E-mail(s) |
cgapbs-r@mail.nih.gov
|
| Phone |
301-496-1550
|
| URL |
http://cgap.nci.nih.gov/
|
| Organization name |
National Cancer Institute
|
| Department |
Cancer Genome Anatomy Project
|
| Street address |
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20852 |
| Country |
USA |
| |
|
| Platform ID |
GPL4 |
| Series (2) |
| GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
| GSE15309 |
Cancer Genome Anatomy Project (CGAP) Human SAGE |
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| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAA |
147 |
1715.17 |
| AAAAAAAAAC |
1 |
11.67 |
| AAAAAAAAAG |
2 |
23.34 |
| AAAAAAAAAT |
5 |
58.34 |
| AAAAAAAAGA |
9 |
105.01 |
| AAAAAAAATC |
1 |
11.67 |
| AAAAAAAATG |
3 |
35.00 |
| AAAAAAAATT |
6 |
70.01 |
| AAAAAAAGAA |
1 |
11.67 |
| AAAAAAAGCA |
1 |
11.67 |
| AAAAAAAGCT |
1 |
11.67 |
| AAAAAAAGTA |
1 |
11.67 |
| AAAAAAATAA |
1 |
11.67 |
| AAAAAAATGT |
1 |
11.67 |
| AAAAAACAAA |
2 |
23.34 |
| AAAAAACAGC |
1 |
11.67 |
| AAAAAACATT |
2 |
23.34 |
| AAAAAACCCA |
20 |
233.36 |
| AAAAAACTCC |
6 |
70.01 |
| AAAAAACTTC |
1 |
11.67 |
Total number of rows: 28260
Table truncated, full table size 526 Kbytes.
| Supplementary data files not provided |
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