GEO help: Mouse over screen elements for information.
Status
Public on Mar 20, 2009
Title
LSAGE_Skin_Normal_B_hs0282
Sample type
SAGE
Anchor
NlaIII
Tag Count
4411636
Tag Length
17
Source name
skin, normal, bulk, long sage, slx-sage, solexa sage, female, seborrheic keratosis
Organism
Homo sapiens
Characteristics
organ/tissue: skin tissue preparation: bulk sex: female cell type: Seborrheic Keratosis other information: SLX-SAGE
Biomaterial provider
Youwen Zhou Lab
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 2313 Tagging_enzyme: Mme I Library_producer: Martin Hirst, Functional Genomics Lab Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, Canada
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL1485
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15314
Cancer Genome Anatomy Project (CGAP) Human Solexa LongSAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAAAAAAAAA
103250
23404.02
AAAAAAAAAAAAAAAAC
1003
227.35
AAAAAAAAAAAAAAAAG
204
46.24
AAAAAAAAAAAAAAAAT
229
51.91
AAAAAAAAAAAAAAACA
702
159.12
AAAAAAAAAAAAAAACC
121
27.43
AAAAAAAAAAAAAAACT
18
4.08
AAAAAAAAAAAAAAAGA
168
38.08
AAAAAAAAAAAAAAAGC
27
6.12
AAAAAAAAAAAAAAAGG
20
4.53
AAAAAAAAAAAAAAAGT
10
2.27
AAAAAAAAAAAAAAATA
82
18.59
AAAAAAAAAAAAAAATC
50
11.33
AAAAAAAAAAAAAAATG
7
1.59
AAAAAAAAAAAAAAATT
10
2.27
AAAAAAAAAAAAAACAA
571
129.43
AAAAAAAAAAAAAACAC
106
24.03
AAAAAAAAAAAAAACAG
19
4.31
AAAAAAAAAAAAAACAT
7
1.59
AAAAAAAAAAAAAACCA
71
16.09
Total number of rows: 59394 Table truncated, full table size 1488 Kbytes .Supplementary data files not provided