GEO help: Mouse over screen elements for information.
Status
Public on Mar 20, 2009
Title
LSAGE_Uterus_normal_B_hs0195
Sample type
SAGE
Anchor
NlaIII
Tag Count
3718463
Tag Length
17
Source name
uterus, normal, bulk, long sage, slx-sage, solexa sage, female
Organism
Homo sapiens
Characteristics
organ/tissue: uterus tissue preparation: bulk sex: female other information: SLX-SAGE
Biomaterial provider
Dianne Miller, British Columbia Cancer Agency
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 2243 Tagging_enzyme: Mme I Library_producer: Martin Hirst, Functional Genomics Lab Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, Canada
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL1485
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15314
Cancer Genome Anatomy Project (CGAP) Human Solexa LongSAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAAAAAAAAA
1456
391.56
AAAAAAAAAAAAAAAAC
97
26.09
AAAAAAAAAAAAAAAAG
21
5.65
AAAAAAAAAAAAAAAAT
142
38.19
AAAAAAAAAAAAAAACA
27
7.26
AAAAAAAAAAAAAAACC
7
1.88
AAAAAAAAAAAAAAACT
5
1.34
AAAAAAAAAAAAAAAGA
3
0.81
AAAAAAAAAAAAAAAGC
2
0.54
AAAAAAAAAAAAAAAGT
2
0.54
AAAAAAAAAAAAAAATA
12
3.23
AAAAAAAAAAAAAAATC
25
6.72
AAAAAAAAAAAAAAATG
2
0.54
AAAAAAAAAAAAAAATT
7
1.88
AAAAAAAAAAAAAACAA
11
2.96
AAAAAAAAAAAAAACAC
5
1.34
AAAAAAAAAAAAAACCC
3
0.81
AAAAAAAAAAAAAACTC
2
0.54
AAAAAAAAAAAAAAGAA
4
1.08
AAAAAAAAAAAAAAGAT
3
0.81
Total number of rows: 305922 Table truncated, full table size 7516 Kbytes .Supplementary data files not provided