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Status
Public on Mar 20, 2009
Title
mSAGE_Embyonic_stem_cell_normal_GM-CSF_IL3_CL
Sample type
SAGE
Anchor
NlaIII
Tag Count
30536
Tag Length
10
Source name
embyronic stem cell, normal, cell line, differentiated, dendritic cell, short
Organism
Mus musculus
Characteristics
organ/tissue: stem cell tissue preparation: cell line sex: unknown other information: Dendritic cells were produced by directed differentiation of the CBA/Ca mouse derived embryonic stem cell line ESF 116 (Fairchild et al, Curr. Biol. 10:1515-8 (2000)).
Extracted molecule
total RNA
Extraction protocol
N/A
Description
Tagging_enzyme: BsmF I CGAP_Numeric_library_ID: 1071 Laboratory: Kathleen Nolan, Paul Fairchild, Stephen Cobbold, Herman Waldmann
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL11
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311
Cancer Genome Anatomy Project (CGAP) Mouse SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAATGGA
1
32.75
AAAAACACCT
1
32.75
AAAAACCACC
27
884.20
AAAAACCTGT
1
32.75
AAAAACTCAC
1
32.75
AAAAAGCTGC
3
98.24
AAAAAGGGTT
1
32.75
AAAAAGTACC
1
32.75
AAAAATAAAA
1
32.75
AAAAATCACT
1
32.75
AAAAATCATC
20
654.96
AAAAATGAAA
1
32.75
AAAAATTATT
1
32.75
AAAACAACCT
1
32.75
AAAACAAGCC
7
229.24
AAAACAAGTC
2
65.50
AAAACAGTGC
1
32.75
AAAACAGTGG
15
491.22
AAAACCACCC
1
32.75
AAAACCAGCC
1
32.75
Total number of rows: 10245 Table truncated, full table size 191 Kbytes .Supplementary data files not provided