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Status |
Public on Mar 20, 2009 |
Title |
mSAGE_Neural_tube_normal_TS13_MMD_SM125 |
Sample type |
SAGE |
Anchor |
NlaIII
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Tag Count |
103594 |
Tag Length |
10 |
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Source name |
embryonic tissue, neuropore, anterior, normal, microscope dissected, extracted short sage, ts13, mid-gestation embryo
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Organism |
Mus musculus |
Characteristics |
organ/tissue: embryonic tissue tissue preparation: microscope dissected age: 8.5 dpc/TS13 sex: unknown
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Biomaterial provider |
Pamela Hoodless Lab
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Extracted molecule |
total RNA |
Extraction protocol |
N/A
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Description |
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 1816 Library_producer: David Charest Lab Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
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Submission date |
Mar 19, 2009 |
Last update date |
Mar 20, 2009 |
Contact name |
Cancer Genome Anatomy Project CGAP |
E-mail(s) |
cgapbs-r@mail.nih.gov
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Phone |
301-496-1550
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URL |
http://cgap.nci.nih.gov/
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Organization name |
National Cancer Institute
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Department |
Cancer Genome Anatomy Project
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Street address |
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City |
Bethesda |
State/province |
MD |
ZIP/Postal code |
20852 |
Country |
USA |
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Platform ID |
GPL11 |
Series (2) |
GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
GSE15311 |
Cancer Genome Anatomy Project (CGAP) Mouse SAGE |
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Data table header descriptions |
TAG |
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COUNT |
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TPM |
tags per million |
Data table |
TAG |
COUNT |
TPM |
AAAAAAAAAA |
105 |
1013.57 |
AAAAAAAAAC |
1 |
9.65 |
AAAAAAAAAT |
12 |
115.84 |
AAAAAAAATC |
1 |
9.65 |
AAAAAAAATG |
3 |
28.96 |
AAAAAAACTA |
2 |
19.31 |
AAAAAAAGAA |
1 |
9.65 |
AAAAAAAGCT |
1 |
9.65 |
AAAAAAAGGG |
1 |
9.65 |
AAAAAAAGTA |
1 |
9.65 |
AAAAAAATAA |
4 |
38.61 |
AAAAAAATAG |
1 |
9.65 |
AAAAAAATGA |
1 |
9.65 |
AAAAAAATTG |
1 |
9.65 |
AAAAAACCAA |
2 |
19.31 |
AAAAAACCAG |
1 |
9.65 |
AAAAAACGAA |
1 |
9.65 |
AAAAAACTTT |
1 |
9.65 |
AAAAAAGTAA |
1 |
9.65 |
AAAAAATAAA |
16 |
154.45 |
Total number of rows: 27056
Table truncated, full table size 487 Kbytes.
Supplementary data files not provided |
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