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Status
Public on Mar 20, 2009
Title
mSAGE_Urogenital_sinus_normal_TS24_MMD_SM032
Sample type
SAGE
Anchor
NlaIII
Tag Count
117201
Tag Length
10
Source name
embryonic tissue, male urogenital sinus, normal, microscope dissected, male, late gestation embryo, extracted short sage, ts24, atlas
Organism
Mus musculus
Characteristics
organ/tissue: embryonic tissue tissue preparation: microscope dissected age: 16.5 days post coitum. reposition of umbilical hernia. theiler stage 24 sex: male
Biomaterial provider
Cheryl Helgason Lab
Extracted molecule
total RNA
Extraction protocol
N/A
Description
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 1273 Library_producer: Jas Khattra, Gene Expression Lab Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL11
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311
Cancer Genome Anatomy Project (CGAP) Mouse SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
98
836.17
AAAAAAAAAC
3
25.60
AAAAAAAAAG
2
17.06
AAAAAAAAAT
22
187.71
AAAAAAAATA
1
8.53
AAAAAAAATG
1
8.53
AAAAAAACTA
2
17.06
AAAAAAACTT
1
8.53
AAAAAAAGAA
1
8.53
AAAAAAAGAC
1
8.53
AAAAAAAGAG
1
8.53
AAAAAAAGAT
2
17.06
AAAAAAAGTA
1
8.53
AAAAAAATAA
4
34.13
AAAAAAATAG
4
34.13
AAAAAAATCA
1
8.53
AAAAAAATTA
1
8.53
AAAAAACAAG
1
8.53
AAAAAACTGG
1
8.53
AAAAAAGAGG
1
8.53
Total number of rows: 30836 Table truncated, full table size 556 Kbytes .Supplementary data files not provided