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Sample GSM384482 Query DataSets for GSM384482
Status Public on Mar 20, 2009
Title mLSAGE_Brain_normal_P84-P90_MMD_SM201
Sample type SAGE
Anchor NlaIII
Tag Count 107041
Tag Length 17
 
Source name brain, normal, other, p84-p90, male, long sage
Organism Mus musculus
Characteristics organ/tissue: brain
tissue preparation: other
age: P84-P90
sex: male
cell type: normal
Biomaterial provider Elizabeth Simpson
Extracted molecule total RNA
Extraction protocol N/A
 
Description Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 2039
Library_producer: Gene Expresion Lab, GSC
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL1349
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15312 Cancer Genome Anatomy Project (CGAP) Mouse LongSAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAAAAAAAAA 209 1952.52
AAAAAAAAAAAAAAAAC 6 56.05
AAAAAAAAAAAAAAAAG 18 168.16
AAAAAAAAAAAAAAAAT 10 93.42
AAAAAAAAAAAAAAACA 1 9.34
AAAAAAAAAAAAAAAGG 2 18.68
AAAAAAAAAAAAAAATA 1 9.34
AAAAAAAAAAAAAAATG 1 9.34
AAAAAAAAAAAAAGAAA 1 9.34
AAAAAAAAAAAAATAAA 1 9.34
AAAAAAAAAAAACAGCA 1 9.34
AAAAAAAAAAAATAAAA 1 9.34
AAAAAAAAAAACAGCAA 1 9.34
AAAAAAAAAAAGAAAAA 2 18.68
AAAAAAAAAAATAGCAA 1 9.34
AAAAAAAAAGAAAAAAA 2 18.68
AAAAAAAACTTGGTTGT 1 9.34
AAAAAAAAGAAAAAAAA 1 9.34
AAAAAAAAGCAAAAAAA 1 9.34
AAAAAAACTAGCAAATG 2 18.68

Total number of rows: 35790

Table truncated, full table size 884 Kbytes.




Supplementary data files not provided

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