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Sample GSM384521 Query DataSets for GSM384521
Status Public on Mar 20, 2009
Title mLSAGE_Embryo_normal_TS2_MMD_SM061
Sample type SAGE
Anchor NlaIII
Tag Count 105533
Tag Length 17
 
Source name whole body, morula, normal, microscope dissected, long sage, ts3, sagelite
Organism Mus musculus
Characteristics organ/tissue: whole body
tissue preparation: microscope dissected
age: TS3
sex: unknown
cell type: Morula
Biomaterial provider Pamela Hoodless Lab
Extracted molecule total RNA
Extraction protocol N/A
 
Description Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 1203
Library_producer: Jas Khattra, Gene Expression Lab
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL1349
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15312 Cancer Genome Anatomy Project (CGAP) Mouse LongSAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAAAAAAAAA 88 833.86
AAAAAAAAAAAAAAAAC 3 28.43
AAAAAAAAAAAAAAAAG 9 85.28
AAAAAAAAAAAAAAAAT 4 37.90
AAAAAAAAAAAAAAACA 1 9.48
AAAAAAAAAAAAACCAA 1 9.48
AAAAAAAAAAAATCCCA 2 18.95
AAAAAAAAAAATAAAAA 1 9.48
AAAAAAAAAAATTTTTA 1 9.48
AAAAAAAAACAAAAAAA 1 9.48
AAAAAAAAACAAACAAA 1 9.48
AAAAAAAAATAAAAAAA 1 9.48
AAAAAAAAATGGGTTCA 1 9.48
AAAAAAAAGTAAAAAAA 1 9.48
AAAAAAAATCAAAAAAA 1 9.48
AAAAAAACATTGACTGG 1 9.48
AAAAAAACTGTGGAGGA 3 28.43
AAAAAAAGAAACATCCA 1 9.48
AAAAAAATAGACATCAG 1 9.48
AAAAAAATAGTCAATAA 1 9.48

Total number of rows: 30545

Table truncated, full table size 754 Kbytes.




Supplementary data files not provided

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