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Sample GSM384523 Query DataSets for GSM384523
Status Public on Mar 20, 2009
Title mLSAGE_Embryo_normal_TS34_MMD_SM173
Sample type SAGE
Anchor NlaIII
Tag Count 94414
Tag Length 17
 
Source name embryo, normal, microscope dissected, e6.5, ts34, long sage
Organism Mus musculus
Characteristics organ/tissue: embryonic tissue
tissue preparation: microscope dissected
age: E6.5
sex: unknown
cell type: normal
mutations: Foxa2 -/-
Biomaterial provider Pamela Hoodless
Extracted molecule total RNA
Extraction protocol N/A
 
Description Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 2023
Library_producer: Gene Expresion Lab, GSC
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL1349
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15312 Cancer Genome Anatomy Project (CGAP) Mouse LongSAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAAAAAAAAA 4 42.37
AAAAAAAAAAAAAATCC 1 10.59
AAAAAAAAAAAAATGGC 1 10.59
AAAAAAAAAAAATCCCA 1 10.59
AAAAAAAAACTCTTTCA 1 10.59
AAAAAAAAAGTTCAGAA 1 10.59
AAAAAAAAATGGGTTCA 1 10.59
AAAAAAAAATGGGTTCG 1 10.59
AAAAAAAAGAAGAAAAG 1 10.59
AAAAAAAATAAAAATCC 1 10.59
AAAAAAAATGAACACAT 1 10.59
AAAAAAACTAGCAAATG 1 10.59
AAAAAAAGAAAGAAAAA 1 10.59
AAAAAAAGCTGCTGAAG 1 10.59
AAAAAAAGTACTGTTTT 1 10.59
AAAAAAATAAATAAATC 1 10.59
AAAAAACACATTTTATT 1 10.59
AAAAAACGAAGAAGAAG 1 10.59
AAAAAACTAGGCCTGGG 1 10.59
AAAAAAGCAGCGAGCGA 1 10.59

Total number of rows: 26581

Table truncated, full table size 677 Kbytes.




Supplementary data files not provided

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