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Status
Public on Mar 20, 2009
Title
mLSAGE_Embryo_normal_TS34_MMD_SM173
Sample type
SAGE
Anchor
NlaIII
Tag Count
94414
Tag Length
17
Source name
embryo, normal, microscope dissected, e6.5, ts34, long sage
Organism
Mus musculus
Characteristics
organ/tissue: embryonic tissue tissue preparation: microscope dissected age: E6.5 sex: unknown cell type: normal mutations: Foxa2 -/-
Biomaterial provider
Pamela Hoodless
Extracted molecule
total RNA
Extraction protocol
N/A
Description
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 2023 Library_producer: Gene Expresion Lab, GSC Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL1349
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15312
Cancer Genome Anatomy Project (CGAP) Mouse LongSAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAAAAAAAAA
4
42.37
AAAAAAAAAAAAAATCC
1
10.59
AAAAAAAAAAAAATGGC
1
10.59
AAAAAAAAAAAATCCCA
1
10.59
AAAAAAAAACTCTTTCA
1
10.59
AAAAAAAAAGTTCAGAA
1
10.59
AAAAAAAAATGGGTTCA
1
10.59
AAAAAAAAATGGGTTCG
1
10.59
AAAAAAAAGAAGAAAAG
1
10.59
AAAAAAAATAAAAATCC
1
10.59
AAAAAAAATGAACACAT
1
10.59
AAAAAAACTAGCAAATG
1
10.59
AAAAAAAGAAAGAAAAA
1
10.59
AAAAAAAGCTGCTGAAG
1
10.59
AAAAAAAGTACTGTTTT
1
10.59
AAAAAAATAAATAAATC
1
10.59
AAAAAACACATTTTATT
1
10.59
AAAAAACGAAGAAGAAG
1
10.59
AAAAAACTAGGCCTGGG
1
10.59
AAAAAAGCAGCGAGCGA
1
10.59
Total number of rows: 26581 Table truncated, full table size 677 Kbytes .Supplementary data files not provided