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Status
Public on Mar 20, 2009
Title
mLSAGE_Embryonic_stem_cells_normal_TS38_MMD_SM302
Sample type
SAGE
Anchor
NlaIII
Tag Count
38952
Tag Length
17
Source name
embryonic stem cell, normal, microscope dissected, long sage
Organism
Mus musculus
Characteristics
organ/tissue: stem cell tissue preparation: microscope dissected age: Unspecified sex: unknown cell type: normal
Biomaterial provider
Pamela Hoodless
Extracted molecule
total RNA
Extraction protocol
N/A
Description
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 2071 Library_producer: Gene Expresion Lab, GSC Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL1349
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15312
Cancer Genome Anatomy Project (CGAP) Mouse LongSAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAAAAAAAAA
10
256.73
AAAAAAAAAAAACTTGA
1
25.67
AAAAAAAAAAACTTTTT
1
25.67
AAAAAAAAAAATAAAGG
1
25.67
AAAAAAAAACAAAAAAC
1
25.67
AAAAAAAAAGAAAAAAA
1
25.67
AAAAAAAAATTTAAGAA
1
25.67
AAAAAAAATAAATACGT
1
25.67
AAAAAAAATTTGTGAAA
1
25.67
AAAAAAACTCTCCTCAA
1
25.67
AAAAAAATAAAAATCCC
1
25.67
AAAAAAATAGTCAATAA
2
51.35
AAAAAACAAGATAATCT
1
25.67
AAAAAACAAGATGACTT
1
25.67
AAAAAACACAAAAAAAA
1
25.67
AAAAAACACAAACTGAG
1
25.67
AAAAAACCAAGAAGGCT
1
25.67
AAAAAACCAGAATCCTT
2
51.35
AAAAAACCTCGTTGTAA
1
25.67
AAAAAACGAAGAAGAAG
1
25.67
Total number of rows: 16047 Table truncated, full table size 409 Kbytes .Supplementary data files not provided