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Sample GSM384570 Query DataSets for GSM384570
Status Public on Mar 20, 2009
Title mLSAGE_Lung_normal_TS19_MMD_SM045
Sample type SAGE
Anchor NlaIII
Tag Count 129998
Tag Length 17
 
Source name lung, normal, microscope dissected, long sage, late gestation embryo, ts25
Organism Mus musculus
Characteristics organ/tissue: lung
tissue preparation: microscope dissected
age: TS25
sex: unknown
Biomaterial provider Pamela Hoodless Lab
Extracted molecule total RNA
Extraction protocol N/A
 
Description Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 1023
Library_producer: Jas Khattra, Gene Expression Lab
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL1349
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15312 Cancer Genome Anatomy Project (CGAP) Mouse LongSAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAAAAAAAAA 309 2376.96
AAAAAAAAAAAAAAAAC 11 84.62
AAAAAAAAAAAAAAAAG 15 115.39
AAAAAAAAAAAAAAAAT 4 30.77
AAAAAAAAAAAAAAACA 1 7.69
AAAAAAAAAAAAAAAGA 1 7.69
AAAAAAAAAAAAAAAGG 1 7.69
AAAAAAAAAAAAAGAAA 3 23.08
AAAAAAAAAAAAATAAA 1 7.69
AAAAAAAAAAAAGAAAA 2 15.38
AAAAAAAAAAAATCCCA 1 7.69
AAAAAAAAAAAATGGCT 1 7.69
AAAAAAAAAAACAAAAA 1 7.69
AAAAAAAAAAACAAGAT 1 7.69
AAAAAAAAAAAGAAAAA 2 15.38
AAAAAAAAAACAAAAAA 1 7.69
AAAAAAAAAACAAGATT 1 7.69
AAAAAAAAAAGAAAAAA 2 15.38
AAAAAAAAAAGAAAACA 1 7.69
AAAAAAAAAATAAAAAA 1 7.69

Total number of rows: 31122

Table truncated, full table size 772 Kbytes.




Supplementary data files not provided

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