GEO help: Mouse over screen elements for information.
Status
Public on Mar 20, 2009
Title
mLSAGE_Pancreas_normal_TS21_MMD_SM225
Sample type
SAGE
Anchor
NlaIII
Tag Count
83740
Tag Length
17
Source name
pancreas, normal, mocroscope dissected, e13.5, ts21, long sage
Organism
Mus musculus
Characteristics
organ/tissue: pancreas tissue preparation: other age: E13.5 sex: unknown cell type: normal mutations: NGN3 GFP+
Biomaterial provider
Cheryl Helgason
Extracted molecule
total RNA
Extraction protocol
N/A
Description
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 2065 Library_producer: Gene Expresion Lab, GSC Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL1349
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15312
Cancer Genome Anatomy Project (CGAP) Mouse LongSAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAAAAAAAAA
93
1110.58
AAAAAAAAAAAAAAAAC
1
11.94
AAAAAAAAAAAAAAAAG
8
95.53
AAAAAAAAAAAAAAAAT
2
23.88
AAAAAAAAAAAAAAACA
2
23.88
AAAAAAAAAATAAAAAA
1
11.94
AAAAAAAAAGAAAAAAA
1
11.94
AAAAAAAAATGGGTTCA
1
11.94
AAAAAAAACTAGCAAAT
1
11.94
AAAAAAAACTTTGCTGC
1
11.94
AAAAAAAATAAAAATCC
1
11.94
AAAAAAAATTATGCCAG
1
11.94
AAAAAAAATTGGAAAAG
1
11.94
AAAAAAAATTTTTTTAT
1
11.94
AAAAAAAGAAATAGAGG
1
11.94
AAAAAAATAAAAATCCC
4
47.77
AAAAAAGAGCGCAGTTA
1
11.94
AAAAAAGTACCAGAGCT
1
11.94
AAAAAAGTTAATTCTAT
1
11.94
AAAAAATAAATTTCTCA
3
35.83
Total number of rows: 31245 Table truncated, full table size 795 Kbytes .Supplementary data files not provided