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Sample GSM386137 Query DataSets for GSM386137
Status Public on Jun 02, 2009
Title Universal Human Reference RNA amplified using the one cycle amplification kit from Affymetrix, 100 ng, rep2
Sample type RNA
 
Source name Universal Human Reference RNA
Organism Homo sapiens
Characteristics protocol: two cycle amplification kit from Affymetrix
Biomaterial provider Stratagene
Extracted molecule total RNA
Extraction protocol not applicable
Label biotin
Label protocol Biotinylated targets were prepared according to manufacturer's instructions (Affymetrix)
 
Hybridization protocol Hybridization mixture was prepared according to Affymetrix procedures
Scan protocol GeneChips were scanned using a 7G scanner (Affymetrix)
Description no additional information
Data processing MAS5.0
 
Submission date Mar 25, 2009
Last update date Aug 28, 2018
Contact name charles decraene
Organization name Institut Curie
Street address 26 rue d'ULM
City Paris
ZIP/Postal code 75248 cedex 05
Country France
 
Platform ID GPL570
Series (1)
GSE15398 Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE done by mas5.0
ABS_CALL done by mas5.0
DETECTION P-VALUE done by mas5.0

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 130.145 P 0.000753643
AFFX-BioB-M_at 161.185 P 0.000340305
AFFX-BioB-3_at 93.9985 P 7.00668e-05
AFFX-BioC-5_at 321.868 P 5.16732e-05
AFFX-BioC-3_at 453.408 P 4.42873e-05
AFFX-BioDn-5_at 879.461 P 4.42873e-05
AFFX-BioDn-3_at 1545.73 P 6.02111e-05
AFFX-CreX-5_at 3545.99 P 4.42873e-05
AFFX-CreX-3_at 4603.28 P 4.42873e-05
AFFX-DapX-5_at 61.7218 P 0.000126798
AFFX-DapX-M_at 366.457 P 0.000753643
AFFX-DapX-3_at 599.165 P 5.16732e-05
AFFX-LysX-5_at 16.4405 P 0.0429619
AFFX-LysX-M_at 47.8535 P 0.0336773
AFFX-LysX-3_at 175.5 P 6.02111e-05
AFFX-PheX-5_at 14.8817 P 0.0284465
AFFX-PheX-M_at 53.473 P 0.0020226
AFFX-PheX-3_at 86.7526 P 0.000126798
AFFX-ThrX-5_at 17.1201 A 0.0780018
AFFX-ThrX-M_at 35.3885 P 0.000661624

Total number of rows: 54675

Table truncated, full table size 1635 Kbytes.




Supplementary file Size Download File type/resource
GSM386137.CEL.gz 7.9 Mb (ftp)(http) CEL
GSM386137.CHP.gz 487.9 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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